Index of Organisms

Organisms names highlighted are those for which the genomes have been completely sequenced. Total number of organisms in which peptidases have been classified is 18179. Statistics for peptidases in the completed genomes can be seen here.

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ORGANISM
NAME MAIN NAME Counts of known and putative peptidases, and homologues
R-plasmid R391 IncJ plasmid R391 2, 0
rabbit Oryctolagus cuniculus 777, 230
Rabbit astrovirus TN/2208/2010 Rabbit astrovirus TN/2208/2010 1, 0
Rabbit calicivirus rabbit hemorrhagic disease virus 1, 0
Rabbit calicivirus Australia 1 MIC-07 Rabbit calicivirus Australia 1 MIC-07 1, 0
Rabbit Calicivirus-Australia 1 (RCV-A1) Isolate MIC-07 Rabbit calicivirus Australia 1 MIC-07 1, 0
Rabbit coronavirus HKU14 Rabbit coronavirus HKU14 3, 0
rabbit fibroma virus rabbit fibroma virus 2, 0
Rabbit fibroma virus (strain Kasza) Shope fibroma virus 1, 0
Rabbit haemorrhagic disease virus rabbit hemorrhagic disease virus 1, 0
rabbit hemorrhagic disease virus rabbit hemorrhagic disease virus 1, 0
rabbit hemorrhagic disease virus RHDV rabbit hemorrhagic disease virus 1, 0
Rabbit hemorrhagic disease virus-AST89 rabbit hemorrhagic disease virus 1, 0
Rabbit hemorrhagic disease virus-BS89 rabbit hemorrhagic disease virus 1, 0
Rabbit hemorrhagic disease virus-V351 rabbit hemorrhagic disease virus 1, 0
Rabbit picobirnavirus Rabbit picobirnavirus 1, 0
Rabbit vesivirus Rabbit vesivirus 1, 0
rabbit, domestic Oryctolagus cuniculus 777, 230
rabbit, European Oryctolagus cuniculus 777, 230
rabbit, Japanese white Oryctolagus cuniculus 777, 230
rabbitpox virus rabbitpox virus 2, 0
Rabbitpox virus Utrecht Vaccinia virus 4, 2
rabbits Oryctolagus cuniculus 777, 230
rabies virus rabies virus 1, 0
raccoon Procyon lotor 1, 1
raccoon dog Nyctereutes procyonoides 1, 0
Rachiplusia ou MNPV Autographa californica MNPV 1, 0
Rachiplusia ou multiple nucleopolyhedrovirus Rachiplusia ou multiple nucleopolyhedrovirus 1, 0
Rachiplusia ou nuclear polyhedrosis virus Rachiplusia ou multiple nucleopolyhedrovirus 1, 0
Rachycentron canadum Rachycentron canadum 0, 1
Rachycentron canadum (Linnaeus, 1766) Rachycentron canadum 0, 1
Racoma waltoni Schizothorax waltoni 0, 1
Racovitzia glacialis Racovitzia glacialis 0, 1
radiation murine leukemia virus radiation murine leukemia virus 1, 0
radish Raphanus sativus 10, 2
Radish mosaic virus Radish mosaic virus 1, 0
Radix peregra Radix peregra 3, 0
Radopholus similis Radopholus similis 4, 0
ragged-robin Lychnis flos-cuculi 1, 0
ragweed, common Ambrosia artemisiifolia 1, 0
Rahnella aquatica Rahnella aquatilis 141, 52
Rahnella aquatilis Rahnella aquatilis 141, 52
Rahnella aquatilis CIP 78.65 = ATCC 33071 Rahnella aquatilis 141, 52
Rahnella aquatilis HX2 Rahnella aquatilis 141, 52
Rahnella sp. 10-Salad Rahnella sp. 10-Salad 1, 0
Rahnella sp. 120-Carrot Rahnella sp. 120-Carrot 1, 0
Rahnella sp. 121-Celery Rahnella sp. 121-Celery 1, 0
Rahnella sp. 136-Carrot Rahnella sp. 136-Carrot 1, 0
Rahnella sp. 142-Salad Rahnella sp. 142-Salad 1, 0
Rahnella sp. 147-Tomato Rahnella sp. 147-Tomato 1, 0
Rahnella sp. 153-Carrot Rahnella sp. 153-Carrot 1, 0
Rahnella sp. 16-Salad Rahnella sp. 16-Salad 0, 1
Rahnella sp. 17-Carrott Rahnella sp. 17-Carrott 1, 0
Rahnella sp. 171-Carrot Rahnella sp. 171-Carrot 0, 1
Rahnella sp. 186-Peach Rahnella sp. 186-Peach 1, 0
Rahnella sp. 193-Celery Rahnella sp. 193-Celery 1, 0
Rahnella sp. 207-Apple Rahnella sp. 207-Apple 0, 1
Rahnella sp. 214-Radish Rahnella sp. 214-Radish 1, 0
Rahnella sp. 285-Celery Rahnella sp. 285-Celery 1, 0
Rahnella sp. 296-Salad Rahnella sp. 296-Salad 1, 0
Rahnella sp. 305-Carrot Rahnella sp. 305-Carrot 1, 0
Rahnella sp. 309-Salad Rahnella sp. 309-Salad 1, 0
Rahnella sp. 311-Carrot Rahnella sp. 311-Carrot 0, 1
Rahnella sp. 320-Radish Rahnella sp. 320-Radish 0, 1
Rahnella sp. 326-Celery Rahnella sp. 326-Celery 1, 0
Rahnella sp. 330-Salad Rahnella sp. 330-Salad 0, 1
Rahnella sp. 336-Pear Rahnella sp. 336-Pear 1, 0
Rahnella sp. 339-Carrot Rahnella sp. 339-Carrot 0, 1
Rahnella sp. 34-Carrot Rahnella sp. 34-Carrot 1, 0
Rahnella sp. 344-Salad Rahnella sp. 344-Salad 1, 0
Rahnella sp. 346-Carrot Rahnella sp. 346-Carrot 0, 1
Rahnella sp. 348-Celery Rahnella sp. 348-Celery 1, 0
Rahnella sp. 36-Radish Rahnella sp. 36-Radish 0, 1
Rahnella sp. 362-Apple Rahnella sp. 362-Apple 1, 0
Rahnella sp. 366-Carrot Rahnella sp. 366-Carrot 0, 1
Rahnella sp. 370-Salad Rahnella sp. 370-Salad 0, 1
Rahnella sp. 371-Carrot Rahnella sp. 371-Carrot 1, 0
Rahnella sp. 376-Carrot Rahnella sp. 376-Carrot 1, 0
Rahnella sp. 377-Radish Rahnella sp. 377-Radish 1, 0
Rahnella sp. 381-Salad Rahnella sp. 381-Salad 1, 0
Rahnella sp. 387-Salad Rahnella sp. 387-Salad 1, 0
Rahnella sp. 39-Strawberry Rahnella sp. 39-Strawberry 1, 0
Rahnella sp. 390-Radish Rahnella sp. 390-Radish 1, 0
Rahnella sp. 401-Salad Rahnella sp. 401-Salad 0, 1
Rahnella sp. 42-Carrot Rahnella sp. 42-Carrot 0, 1
Rahnella sp. 51-Carrot Rahnella sp. 51-Carrot 0, 1
Rahnella sp. 55-Salad Rahnella sp. 55-Salad 1, 0
Rahnella sp. 56-Salad Rahnella sp. 56-Salad 0, 1
Rahnella sp. 57-Carrot Rahnella sp. 57-Carrot 0, 1
Rahnella sp. 59-Radish Rahnella sp. 59-Radish 1, 0
Rahnella sp. 71-Salad Rahnella sp. 71-Salad 1, 0
Rahnella sp. 73-Celery Rahnella sp. 73-Celery 0, 1
Rahnella sp. 75-Radish Rahnella sp. 75-Radish 1, 0
Rahnella sp. 9-Pear Rahnella sp. 9-Pear 1, 0
Rahnella sp. 91-Salad Rahnella sp. 91-Salad 1, 0
Rahnella sp. enrichment culture clone MS32-6A Rahnella sp. enrichment culture clone MS32-6A 1, 0
Rahnella sp. enrichment culture clone MS32-6C Rahnella sp. enrichment culture clone MS32-6C 0, 1
Rahnella sp. Y9602 Rahnella sp. Y9602 136, 55
rainbow fern Selaginella uncinata 1, 0
rainbow mabuya Trachylepis quinquetaeniata 1, 0
rainbow runner Elagatis bipinnulata 0, 1
rainbow sharkminnow Epalzeorhynchos frenatus 0, 1
rainbow smelt Osmerus mordax 30, 14
rainbow trout Oncorhynchus mykiss 558, 305
Raja erinacea Raja erinacea 6, 1
Raja erinacia Raja erinacea 6, 1
Rajah Sundaic Maxomys Maxomys rajah 0, 2
Ralstonia basilensis Cupriavidus basilensis 150, 64
Ralstonia eutropha Cupriavidus necator 207, 76
Ralstonia eutropha CH34 Cupriavidus metallidurans 149, 60
Ralstonia eutropha H16 Cupriavidus necator 207, 76
Ralstonia eutropha JMP134 Cupriavidus necator 207, 76
Ralstonia eutropha JMP134 Cupriavidus pinatubonensis 145, 70
Ralstonia mannitolilytica Ralstonia mannitolilytica 64, 23
Ralstonia mannitolytica Ralstonia mannitolilytica 64, 23
Ralstonia metallidurans Cupriavidus metallidurans 149, 60
Ralstonia metallidurans CH34 Cupriavidus metallidurans 149, 60
Ralstonia oxalatica Wautersia oxalatica 2, 0
Ralstonia oxalaticus Wautersia oxalatica 2, 0
Ralstonia phage phiRSA1 Ralstonia phage phiRSA1 1, 0
Ralstonia phage RSA1 Ralstonia phage phiRSA1 1, 0
Ralstonia pickettii Ralstonia pickettii 317, 99
Ralstonia pickettii 12D Ralstonia pickettii 317, 99
Ralstonia pickettii 12J Ralstonia pickettii 317, 99
Ralstonia pickettii biovar 3/thomasii Ralstonia mannitolilytica 64, 23
Ralstonia pickettii DTP0602 Ralstonia pickettii 317, 99
Ralstonia pickettii OR214 Ralstonia pickettii 317, 99
Ralstonia solanacearum Ralstonia solanacearum 274, 122
Ralstonia solanacearum CFBP2957 Ralstonia solanacearum 274, 122
Ralstonia solanacearum CMR15 Ralstonia solanacearum 274, 122
Ralstonia solanacearum FQY_4 Ralstonia solanacearum 274, 122
Ralstonia solanacearum GMI1000 Ralstonia solanacearum 274, 122
Ralstonia solanacearum IPO1609 Ralstonia solanacearum 274, 122
Ralstonia solanacearum K60-1 Ralstonia solanacearum 274, 122
Ralstonia solanacearum MolK2 Ralstonia solanacearum 274, 122
Ralstonia solanacearum phage RSA1 Ralstonia phage phiRSA1 1, 0
Ralstonia solanacearum Po82 Ralstonia solanacearum 274, 122
Ralstonia solanacearum PSI07 Ralstonia solanacearum 274, 122
Ralstonia solanacearum SD54 Ralstonia solanacearum 274, 122
Ralstonia solanacearum strain MolK2 Ralstonia solanacearum 274, 122
Ralstonia solanacearum UW551 Ralstonia solanacearum 274, 122
Ralstonia sp. 5_2_56FAA Ralstonia sp. 5_2_56FAA 98, 20
Ralstonia sp. 5_7_47FAA Ralstonia sp. 5_7_47FAA 82, 9
Ralstonia sp. A12 Ralstonia sp. A12 75, 29
Ralstonia sp. AU12-08 Ralstonia sp. AU12-08 76, 31
Ralstonia sp. CH34 Cupriavidus metallidurans 149, 60
Ralstonia sp. GA3-3 Ralstonia sp. GA3-3 67, 27
Ralstonia sp. JS705 Ralstonia sp. JS705 1, 0
Ralstonia sp. PBA Ralstonia sp. PBA 59, 12
Ralstonia sp. SBUG 290 Ralstonia sp. SBUG 290 1, 0
Ralstonia sp. XJ12B Ralstonia sp. XJ12B 1, 0
Ralstonia syzygii Ralstonia syzygii 80, 26
Ralstonia syzygii R24 Ralstonia syzygii 80, 26
Ralstonia taiwanensis Cupriavidus taiwanensis 121, 42
Ralstonia thomasii Ralstonia mannitolilytica 64, 23
Ramibacterium alactolyticum Pseudoramibacter alactolyticus 50, 12
Ramibacterium dentium Pseudoramibacter alactolyticus 50, 12
Ramibacterium pleuriticum Pseudoramibacter alactolyticus 50, 12
Ramibacterium ramosum Clostridium ramosum 68, 12
Ramichloridium mackenziei Rhinocladiella mackenziei 127, 53
ramie Boehmeria nivea 1, 0
Ramlibacter tataouinensis Ramlibacter tataouinensis 105, 25
Ramlibacter tataouinensis TTB310 Ramlibacter tataouinensis 105, 25
ramorum blight Phytophthora ramorum 253, 94
ramtil Guizotia abyssinica 1, 0
ramtilla Guizotia abyssinica 1, 0
Rana (Pelophylax) nigromaculata Pelophylax nigromaculatus 2, 1
Rana catesbeiana Rana catesbeiana 20, 3
Rana esculenta Rana esculenta 2, 0
Rana esculenta synklepton Rana esculenta 2, 0
Rana kl. esculenta Rana esculenta 2, 0
Rana klepton esculenta Rana esculenta 2, 0
Rana lessonae x Rana ridibunda Rana esculenta 2, 0
Rana nigromaculata Pelophylax nigromaculatus 2, 1
Rana ridibunda Rana ridibunda 2, 0
Rana ridibundus Rana ridibunda 2, 0
Rana synklepton esculenta Rana esculenta 2, 0
Ranatra unicolor Ranatra unicolor 1, 0
Ranunculus macranthus Ranunculus macranthus 1, 0
Ranunculus macranthus Scheele Ranunculus macranthus 1, 0
Ranzania laevis Ranzania laevis 0, 1
Ranzania laevis (Pennant, 1776) Ranzania laevis 0, 1
Raoultella ornithinolytica Raoultella ornithinolytica 158, 58
Raoultella ornithinolytica B6 Raoultella ornithinolytica 158, 58
Raoultella planticola Klebsiella planticola 73, 32
Raoultella planticola Raoultella planticola 13, 4
Raoultella planticola ATCC 33531 Raoultella planticola 13, 4
Raoultella terrigena Raoultella terrigena 4, 0
rape Brassica napus 1122, 346
rape, oil-seed Brassica rapa 71, 3
rapeseeds Brassica napus 1122, 346
Raphanus sativus Raphanus sativus 10, 2
Raphidiopsis brookii Raphidiopsis brookii 86, 15
Raphidiopsis brookii D9 Raphidiopsis brookii 86, 15
Raphidiopsis sp. PMC00.05 Raphidiopsis sp. PMC00.05 1, 0
Raphidonema longiseta Koliella longiseta 1, 0
Raptor adenovirus 1 Raptor adenovirus 1 1, 0
Raptor adenovirus A Raptor adenovirus A 1, 0
Rarobacter faecitabidus Rarobacter faecitabidus 1, 0
Rasamsonia emersonii Talaromyces emersonii 112, 27
Rasamsonia emersonii Rasamsonia emersonii 3, 0
Rasamsonia emersonii CBS 393.64 Rasamsonia emersonii 3, 0
rasbora Rasbora heteromorpha 2, 0
Rasbora bankanensis Rasbora bankanensis 0, 1
Rasbora bankanensis (Bleeker, 1853) Rasbora bankanensis 0, 1
Rasbora elegans Rasbora elegans 2, 0
Rasbora elegans Volz, 1903 Rasbora elegans 2, 0
Rasbora heteromorpha Rasbora heteromorpha 2, 0
Rasbora merah Boraras merah 0, 1
Rasbora paviana Rasbora paviei 2, 0
Rasbora paviei Rasbora paviei 2, 0
Rasbora steineri Rasbora steineri 0, 1
Rasbora steineri Nichols & Pope, 1927 Rasbora steineri 0, 1
rasbora, elegant Rasbora elegans 2, 0
raspberry ringspot virus raspberry ringspot virus 1, 0
raspberry ringspot virus RRV raspberry ringspot virus 1, 0
rat Rattus norvegicus 740, 189
Rat coronavirus Murine coronavirus 7, 0
Rat coronavirus Parker Rat coronavirus Parker 3, 0
Rat coronavirus strain Parker Rat coronavirus Parker 3, 0
Rat cytomegalovirus Murid herpesvirus 2 2, 0
rat cytomegalovirus (strain Maastricht) rat cytomegalovirus Maastricht 1, 0
rat cytomegalovirus Maastricht rat cytomegalovirus Maastricht 1, 0
rat lungworm Angiostrongylus cantonensis 134, 161
rat Moloney murine leukemia virus MoMuLV Moloney murine leukemia virus 1, 0
rat sarcoma virus rat sarcoma virus 1, 0
rat tapeworm Hymenolepis diminuta 121, 130
Rat theilovirus 1 Theilovirus 4, 9
rat, African grass Arvicanthis niloticus 1, 0
rat, African marsh Dasymys incomtus 0, 1
rat, African soft-furred Mastomys natalensis 3, 1
rat, black Rattus rattus 2, 16
rat, black-footed pygmy rice Oligoryzomys nigripes 0, 1
rat, brown Rattus norvegicus 740, 189
rat, brush-tailed Octodon degus 644, 217
rat, common Rattus norvegicus 740, 189
rat, hispid cotton Sigmodon hispidus 0, 1
rat, laboratory Rattus norvegicus 740, 189
rat, marsh rice Oryzomys palustris 0, 6
rat, Polynesian Rattus exulans 0, 25
rat, red rock Aethomys chrysophilus 0, 1
rat, yellow pygmy rice Oligoryzomys flavescens 0, 1
rat-headed rice rat Sooretamys angouya 0, 1
ratfish Gonorynchus greyi 0, 1
Rathayibacter toxicus Rathayibacter toxicus 21, 4
rats Rattus norvegicus 740, 189
rats Rattus sp. 2, 2
rattlesnake, eastern diamondback Crotalus adamanteus 97, 12
rattlesnake, Mojave Crotalus scutulatus 5, 0
rattlesnake, red Crotalus ruber 1, 1
rattlesnake, tropical Crotalus durissus terrificus 7, 0
rattlesnake, western diamondback Crotalus atrox 15, 2
Rattus (Berylmys) berdmorei Berylmys berdmorei 1, 6
Rattus andamanensis Rattus andamanensis 0, 3
Rattus argentiventer Rattus argentiventer 0, 10
Rattus berdmorei Berylmys berdmorei 1, 6
Rattus brunneusculus Rattus tanezumi 0, 1
Rattus edwardsi Leopoldamys edwarsi 0, 23
Rattus everetti Rattus everetti 0, 1
Rattus exulans Rattus exulans 0, 25
Rattus fulvescens Niviventer fulvescens 0, 7
Rattus fuscipes Rattus fuscipes 1, 0
Rattus hoffmanni Rattus hoffmanni 0, 1
Rattus losea sakeratensis Rattus sakeratensis 0, 5
Rattus morotaiensis Rattus morotaiensis 0, 4
Rattus nitidus Rattus nitidus 0, 2
Rattus norvegicus Rattus norvegicus 740, 189
Rattus novaeguineae Rattus novaeguineae 0, 1
Rattus praetor Rattus praetor 0, 2
Rattus rattoides Rattus rattus 2, 16
Rattus rattus Rattus rattus 2, 16
Rattus rattus satarae Rattus satarae 0, 4
Rattus remotus Rattus andamanensis 0, 3
Rattus sakeratensis Rattus sakeratensis 0, 5
Rattus satarae Rattus satarae 0, 4
Rattus sikkimensis Rattus andamanensis 0, 3
Rattus sp. Rattus sp. 2, 2
Rattus sp. ABTC 44179 Rattus exulans 0, 25
Rattus sp. ABTC 49242 Rattus exulans 0, 25
Rattus sp. R3 MP-2010 Rattus sp. R3 MP-2010 0, 29
Rattus surifer Maxomys surifer 1, 5
Rattus tanezumi Rattus tanezumi 0, 1
Rattus tiomanicus Rattus tiomanicus 0, 2
Ratufa affinis Ratufa affinis 0, 1
Ratufa bicolor Ratufa bicolor 0, 1
Rauscher murine leukemia virus Rauscher murine leukemia virus 1, 0
Rauvolfia serpentina Rauvolfia serpentina 1, 0
Rauvolfia serpentina (L.) Benth. ex Kurz Rauvolfia serpentina 1, 0
Rauwolfia serpentina Rauvolfia serpentina 1, 0
Ravavy miafina Ravavy miafina 1, 0
Ravenala madagascariensis Ravenala madagascariensis 1, 0
Ravenea hildebrandti Ravenea hildebrandtii 1, 0
Ravenea hildebrandtii Ravenea hildebrandtii 1, 0
Ravenea hildebrandtii H.Wendl. ex C.D.Bouche Ravenea hildebrandtii 1, 0
ray, marbled electric Torpedo marmorata 0, 1
rayado fino virus, maize maize rayado fino virus 1, 0
razborka trpaslici Microdevario nana 0, 1
razorback sucker Xyrauchen texanus 0, 4
razorfish Aeoliscus strigatus 0, 1
RCMV red clover mottle virus 1, 0
RD114 retrovirus RD114 retrovirus 1, 0
Recombinant chimeric Hepatitis C virus 1b/2a 432/JFH-1 hepatitis C virus 266, 3
recombinant coronavirus recombinant coronavirus 5, 0
Recombinant Hepatitis C virus 3a-2a (SA1/JFH1) hepatitis C virus 266, 3
Recombinant Hepatitis C virus DBN-JFH1 hepatitis C virus 266, 3
Recombinant Hepatitis C virus DH1-JFH1 hepatitis C virus 266, 3
Recombinant Hepatitis C virus DH5-JFH1 hepatitis C virus 266, 3
Recombinant Hepatitis C virus DH6-JFH1 hepatitis C virus 266, 3
Recombinant Hepatitis C virus ED43(5UTR-NS2)/JFH1_T827A,T977S hepatitis C virus 266, 3
Recombinant Hepatitis C virus H77(5UTR-NS2)/JFH1_V787A,Q1247L hepatitis C virus 266, 3
Recombinant Hepatitis C virus HK6a(5UTR-NS2)/JFH1_F350S,N417T hepatitis C virus 266, 3
Recombinant Hepatitis C virus HK6a/JFH1 hepatitis C virus 266, 3
Recombinant Hepatitis C virus J4(5UTR-NS2)/JFH1_F886L,Q1496L hepatitis C virus 266, 3
Recombinant Hepatitis C virus J4/JFH1 hepatitis C virus 266, 3
Recombinant Hepatitis C virus J6(5UTR-NS2)/JFH1 hepatitis C virus 266, 3
Recombinant Hepatitis C virus J6/JFH1(DH6-NS5A) hepatitis C virus 266, 3
Recombinant Hepatitis C virus J6/JFH1(ED43-NS5A) hepatitis C virus 266, 3
Recombinant Hepatitis C virus J6/JFH1(H77C-NS5A) hepatitis C virus 266, 3
Recombinant Hepatitis C virus J6/JFH1(HCV1-NS5A) hepatitis C virus 266, 3
Recombinant Hepatitis C virus J6/JFH1(HK6a-NS5A) hepatitis C virus 266, 3
Recombinant Hepatitis C virus J6/JFH1(J1-NS5A) hepatitis C virus 266, 3
Recombinant Hepatitis C virus J6/JFH1(J4-NS5A) hepatitis C virus 266, 3
Recombinant Hepatitis C virus J6/JFH1(J6-NS5A) hepatitis C virus 266, 3
Recombinant Hepatitis C virus J6/JFH1(QC69-NS5A) hepatitis C virus 266, 3
Recombinant Hepatitis C virus J6/JFH1(S52-NS5A) hepatitis C virus 266, 3
Recombinant Hepatitis C virus J6/JFH1(SA13-NS5A) hepatitis C virus 266, 3
Recombinant Hepatitis C virus J6/JFH1(TN-NS5A) hepatitis C virus 266, 3
Recombinant Hepatitis C virus J6/JFH1-452 hepatitis C virus 266, 3
Recombinant Hepatitis C virus J6/JFH1-HK6a hepatitis C virus 266, 3
Recombinant Hepatitis C virus J6/JFH1-J6 hepatitis C virus 266, 3
Recombinant Hepatitis C virus J6/JFH1-JCH2 hepatitis C virus 266, 3
Recombinant Hepatitis C virus J6/JFH1-JCH4 hepatitis C virus 266, 3
Recombinant Hepatitis C virus J6/JFH1-K3a.650 hepatitis C virus 266, 3
Recombinant Hepatitis C virus J6/JFH1-NZL1 hepatitis C virus 266, 3
Recombinant Hepatitis C virus J6/JFH1-S52 hepatitis C virus 266, 3
Recombinant Hepatitis C virus J6/JFH1-SA13 hepatitis C virus 266, 3
Recombinant Hepatitis C virus J8/JFH1 hepatitis C virus 266, 3
Recombinant Hepatitis C virus QC69/JFH1 hepatitis C virus 266, 3
Recombinant Hepatitis C virus S52(5UTR-NS2)/JFH1_I793S, K1404Q hepatitis C virus 266, 3
Recombinant Hepatitis C virus S52/JFH1 Recombinant Hepatitis C virus S52/JFH1 1, 0
Recombinant Hepatitis C virus SA13(5UTR-NS2)/JFH1_A1022G,K1119R hepatitis C virus 266, 3
Recombinant Hepatitis C Virus SA13/JFH1 hepatitis C virus 266, 3
Recombinant Hepatitis C virus TN-JFH1 hepatitis C virus 266, 3
recombinant virus 6918VP60-T2 recombinant virus 6918VP60-T2 2, 0
Recombining vector pCRBAF1 Recombining vector pCRBAF1 1, 0
Rectoris posehensis Rectoris posehensis 0, 2
Rectoris posehensis Lin, 1935 Rectoris posehensis 0, 2
red abalone Haliotis rufescens 2, 0
red and white giant flying squirrel Petaurista alborufus 0, 1
red baboon Papio hamadryas 4, 3
red bandfish Cepola macrophthalma 0, 2
red bryony Bryonia dioica 1, 0
red cedar Juniperus virginiana 1, 0
red clover Trifolium pratense 8, 0
red clover mottle virus red clover mottle virus 1, 0
red clover mottle virus RCMV red clover mottle virus 1, 0
Red clover vein mosaic virus Red clover vein mosaic virus 1, 0
red cylinder snake Cylindrophis ruffus 1, 0
red diamond rattlesnake Crotalus ruber 1, 1
red fire ant Solenopsis invicta 487, 215
red flash Sarcocheilichthys parvus 0, 1
red flour beetle Tribolium castaneum 534, 186
red fox Vulpes vulpes 0, 2
red goosefoot Chenopodium rubrum 1, 0
red guenon Erythrocebus patas 4, 0
red harvester ant Pogonomyrmex barbatus 405, 193
red imported fire ant Solenopsis invicta 487, 215
red king crab Paralithodes camtschatica 6, 0
red meerkat Cynictis penicillata 0, 1
red oak Quercus rubra 1, 0
red panda Ailurus fulgens 0, 2
red pepper Capsicum annuum 35, 1
red pine Pinus resinosa 1, 0
red piranha Pygocentrus nattereri 1, 0
red porgy Pagrus pagrus 1, 1
red postman butterfly Heliconius erato 8, 1
red rattlesnake Crotalus ruber 1, 1
red rice Oryza rufipogon 549, 175
red ringspot virus, blueberry blueberry red ringspot virus 2, 0
red rock rat Aethomys chrysophilus 0, 1
red ruffed lemur Varecia rubra 1, 0
Red ruffed lemur Varecia rubra 1, 0
red scorpionfish Scorpaena scrofa 0, 1
red seabream Pagrus major 13, 3
red shanked douc langur Pygathrix nemaeus 3, 0
Red shanked douc langur Pygathrix nemaeus 3, 0
red shiner Cyprinella lutrensis 0, 1
red spider mite Tetranychus urticae 301, 126
red spiny rat Maxomys surifer 1, 5
red squirrel Sciurus vulgaris 1, 1
red squirrel Tamiasciurus hudsonicus 0, 2
red stem pokeweed Phytolacca americana 2, 0
red stomach worm Haemonchus contortus 507, 179
red swamp crayfish Procambarus clarkii 1, 4
red tail Pagrus major 13, 3
red throated ascidian Herdmania momus 1, 0
red whalefish Barbourisia rufa 0, 1
red wiggler worm Eisenia foetida 10, 0
red-bellied black snake Pseudechis porphyriacus 3, 0
red-bellied lemur Eulemur rubriventer 0, 1
red-bellied piranha Pygocentrus nattereri 1, 0
Red-bellied titi Callicebus moloch 6, 4
red-capped mangabey Cercocebus torquatus 0, 1
red-cheeked gibbon Nomascus gabriellae 3, 0
red-chested mustached tamarin Saguinus labiatus 5, 2
red-crested turaco Tauraco erythrolophus 402, 212
red-crowned mangabey Cercocebus torquatus 0, 1
red-eared slider Trachemys scripta 4, 1
red-eared slider turtle Trachemys scripta 4, 1
Red-fronted lemur Eulemur rufus 0, 1
red-headed rock agama Agama agama 1, 0
red-legged seriema Cariama cristata 400, 217
red-spotted newt Notophthalmus viridescens 6, 0
red-striped toadfish Tetraodon erythrotaenia 0, 1
red-tail dwarf puffer Carinotetraodon irrubesco 0, 1
red-tailed black sharkminnow Epalzeorhynchos bicolor 0, 1
red-tailed pipe snake Cylindrophis ruffus 1, 0
red-tailed sportive lemur Lepilemur ruficaudatus 0, 1
red-tailed squirrel Sciurus granatensis 0, 1
red-throated diver Gavia stellata 389, 203
red-throated loon Gavia stellata 389, 203
redeye Scardinius erythrophthalmus 0, 1
redfin Perca fluviatilis 0, 2
redroot amaranth Amaranthus retroflexus 0, 1
redroot sage Salvia miltiorrhiza 2, 0
redspot chub Nocomis asper 0, 2
redspotted hawkfish Amblycirrhitus pinos 0, 1
redtail sharkminnow Epalzeorhynchos bicolor 0, 1
redworm Eisenia foetida 10, 0
reed palm Chamaedorea seifrizii 1, 0
reef stonefish Synanceia verrucosa 0, 1
Regalecus glesne Regalecus glesne 0, 1
Regiella insecticola Candidatus Regiella insecticola 66, 3
Reicheltia halsteadi Reicheltia halsteadi 0, 1
Reinekea blandensis Reinekea blandensis 90, 25
Reinekea blandensis MED297 Reinekea blandensis 90, 25
Reinhardtius evermanni Atheresthes evermanni 0, 1
Reishia clavigera Reishia clavigera 10, 1
Reithrodon auritus Reithrodon auritus 0, 2
Reithrodontomys brevirostris Reithrodontomys brevirostris 0, 1
Reithrodontomys creper Reithrodontomys creper 0, 5
Reithrodontomys gracilis Reithrodontomys gracilis 0, 1
Reithrodontomys megalotis Reithrodontomys megalotis 0, 3
Reithrodontomys mexicanus Reithrodontomys mexicanus 0, 7
Reithrodontomys microdon Reithrodontomys microdon 0, 2
Reithrodontomys sp. ROM114291 Reithrodontomys sp. ROM114291 0, 1
Reithrodontomys sp. ROM116801 Reithrodontomys sp. ROM114291 0, 1
Reithrodontomys sp. ROM116805 Reithrodontomys sp. ROM116805 0, 1
Reithrodontomys sp. ROM116835 Reithrodontomys sp. ROM116835 0, 1
Reithrodontomys spectabilis Reithrodontomys spectabilis 0, 2
Remo flounder Oncopterus darwinii 0, 1
Remora osteochir Remora osteochir 0, 1
Remora osteochir (Cuvier, 1829) Remora osteochir 0, 1
ren seng Panax ginseng 1, 1
Rena humilis Rena humilis 1, 0
Renealmia alpinia Renealmia alpinia 1, 0
Renealmia alpinia (Rottb.) Maas Renealmia alpinia 1, 0
Renibacterium salmoninarum Renibacterium salmoninarum 136, 40
Renibacterium salmoninarum ATCC 33209 Renibacterium salmoninarum 136, 40
Renibacterium salmoninarum Sanders and Fryer 1980 Renibacterium salmoninarum 136, 40
Renilla muelleri Renilla muelleri 0, 1
Renilla reniformis Renilla reniformis 0, 1
Reovirus 1 Mammalian orthoreovirus 1 1, 0
Reovirus 3 mammalian orthoreovirus 3 1, 0
Reovirus GCRV104 Reovirus GCRV104 1, 0
Reovirus type 1 Mammalian orthoreovirus 1 1, 0
Reovirus type 3 mammalian orthoreovirus 3 1, 0
reperepe Callorhinchus milii 685, 208
Reporter vector pCBTuMV-GFP Reporter vector pCBTuMV-GFP 4, 0
reproductive and respiratory syndrome virus, porcine porcine reproductive and respiratory syndrome virus 51, 0
Reptile vesivirus Cro1 vesicular exanthema of swine virus 4, 0
Reptilian orthoreovirus Reptilian orthoreovirus 2, 0
Reptilian reovirus Reptilian orthoreovirus 2, 0
respiratory and reproductive syndrome virus, porcine porcine reproductive and respiratory syndrome virus 51, 0
resurrection grass Sporobolus stapfianus 1, 0
reticulate boxfish Ostracion solorensis 0, 1
reticulated hillstream loach Sewellia lineolata 0, 2
reticuloendotheliosis virus reticuloendotheliosis virus 1, 0
Reticuloendotheliosis virus reticuloendotheliosis virus 1, 0
reticuloendotheliosis virus A REV-A reticuloendotheliosis virus 1, 0
reticuloendotheliosis virus REV-A reticuloendotheliosis virus 1, 0
reticuloendotheliosis virus, avian reticuloendotheliosis virus 1, 0
Reticulomyxa filosa Reticulomyxa filosa 192, 237
retrovirus 5, human human retrovirus HRV-5 1, 0
retrovirus TvERV, Trichosurus vulpecula Trichosurus vulpecula retrovirus TvERV 1, 0
retrovirus, jaagsiekte sheep ovine pulmonary adenocarcinoma virus 1, 0
retrovirus, Phascolarctos cinereus Phascolarctos cinereus retrovirus 1, 0
retrovirus, simian simian type D virus 1 1, 0
retrovirus, simian SRV-1 type D simian SRV-1 type D retrovirus 1, 0
retrovirus, squirrel monkey squirrel monkey retrovirus 1, 0
REV-A reticuloendotheliosis virus 1, 0
Rex sole Glyptocephalus zachirus 0, 1
Rhabdadenia biflora Rhabdadenia biflora 1, 0
Rhabdadenia biflora (Jacq.) Muell.Arg. Rhabdadenia biflora 1, 0
Rhabditis elegans Caenorhabditis elegans 430, 95
Rhabditophanes sp. KR3021 Rhabditophanes sp. KR3021 315, 147
Rhabdophis tigrinus Rhabdophis tigrinus 1, 0
Rhabdophis tigrinus tigrinus Rhabdophis tigrinus 1, 0
Rhabdopleura compacta Rhabdopleura compacta 1, 0
Rhacodactylus auriculatus Rhacodactylus auriculatus 1, 0
rhadinovirus 17577, Macaca mulatta Macaca mulatta rhadinovirus 17577 1, 0
Rhagastis mongoliana Rhagastis mongoliana 0, 1
Rhagastis mongoliana (Butler, 1876) Rhagastis mongoliana 0, 1
Rhamphomyia sp. JKM-2003 Rhamphomyia sp. NCSU-97010438 0, 1
Rhamphomyia sp. NCSU-97010438 Rhamphomyia sp. NCSU-97010438 0, 1
Rhazya stricta Rhazya stricta 2, 0
Rhazya stricta Decne. Rhazya stricta 2, 0
Rhea americana Rhea americana 0, 1
Rhea pennata Pterocnemia pennata 0, 1
rhea, greater Rhea americana 0, 1
Rhechostica chalcodes Aphonopelma chalcodes 1, 1
Rheinheimera nanhaiensis Rheinheimera nanhaiensis 109, 30
Rheinheimera nanhaiensis E407-8 Rheinheimera nanhaiensis 109, 30
Rheinheimera perlucida Rheinheimera perlucida 6, 2
Rheinheimera sp. A13L Rheinheimera sp. A13L 139, 29
Rheinheimera sp. Chandigarh Rheinheimera sp. Chandigarh 1, 0
Rheinheimera sp. F8 Rheinheimera sp. F8 1, 0
Rheinheimera sp. SA_1 Rheinheimera sp. SA_1 1, 0
Rheithrosciurus macrotis Rheithrosciurus macrotis 0, 1
Rheocricotopus sp. 2 SRM-2010 Rheocricotopus sp. 2 SRM-2010 0, 1
Rheomys thomasi Rheomys thomasi 0, 1
Rheotanytarsus pentapoda Rheotanytarsus pentapoda 0, 1
Rheotanytarsus sp. To176 Rheotanytarsus sp. To176 0, 1
Rhescyntis hippodamia Rhescyntis hippodamia 0, 1
Rhesus cytomegalovirus Rhesus cytomegalovirus 2, 0
Rhesus EBV-llike herpesvirus Macacine herpesvirus 4 1, 0
Rhesus Epstein Barr virus Macacine herpesvirus 4 1, 0
rhesus HHV-4-like virus cercopithicine herpesvirus 15 1, 0
Rhesus lymphocryptovirus cercopithicine herpesvirus 15 1, 0
rhesus macaque Macaca mulatta 889, 284
Rhesus macaque cytomegalovirus Rhesus cytomegalovirus 2, 0
rhesus macaque rhadinovirus Cercopithecine herpesvirus 17 1, 0
rhesus macaques Macaca mulatta 889, 284
Rhesus monkey Macaca mulatta 889, 284
Rhesus monkey cytomegalovirus Rhesus cytomegalovirus 2, 0
rhesus monkeys Macaca mulatta 889, 284
Rhesus rhadinovirus Cercopithecine herpesvirus 17 1, 0
Rhinecanthus aculeatus Rhinecanthus aculeatus 0, 1
Rhinecanthus aculeatus (Linnaeus, 1758) Rhinecanthus aculeatus 0, 1
Rhinella arenarum Bufo arenarum 2, 0
Rhinesomus gibbosus Tetrosomus gibbosus 0, 1
Rhinesomus triqueter Rhinesomus triqueter 0, 1
Rhineura floridana Rhineura floridana 1, 0
Rhingia nasica Rhingia nasica 0, 1
Rhinichthys atratulus Rhinichthys atratulus 1, 1
Rhinichthys atratulus (Hermann, 1804) Rhinichthys atratulus 1, 1
Rhinichthys cataractae Rhinichthys cataractae 1, 1
Rhinichthys cataractae (Valenciennes, 1842) Rhinichthys cataractae 1, 1
rhinitis A virus, equine equine rhinovirus type 1 4, 0
rhino garra Garra bicornuta 0, 1
Rhinocephalus nigrescens Rhinocephalus nigrescens 1, 0
Rhinocerophis alternatus Bothrops alternatus 1, 0
Rhinoceros hornbill Buceros rhinoceros 384, 210
Rhinocladiella mackenziei Rhinocladiella mackenziei 127, 53
Rhinocladiella mackenziei CBS 650.93 Rhinocladiella mackenziei 127, 53
Rhinocryptis annectens Protopterus annectens 0, 2
Rhinolophus affinis pestivirus 1 Rhinolophus affinis pestivirus 1 1, 0
Rhinolophus ferrumequinum Rhinolophus ferrumequinum 10, 2
Rhinolophus macrotis Rhinolophus macrotis 1, 0
Rhinolophus pearsoni Rhinolophus pearsonii 1, 0
Rhinolophus pearsonii Rhinolophus pearsonii 1, 0
Rhinolophus pusillus Rhinolophus pusillus 1, 0
Rhinolophus rouxii sinicus Rhinolophus sinicus 1, 0
Rhinolophus ruwenzorii Rhinolophus ruwenzorii 1, 0
Rhinolophus sinicus Rhinolophus sinicus 1, 0
Rhinopithecus bieti Rhinopithecus bieti 2, 0
Rhinopithecus roxellana Rhinopithecus roxellana 851, 290
Rhinoplocephalus nigrescens Rhinoplocephalus nigrescens 2, 0
Rhinopoma hardwickii Rhinopoma hardwickii 0, 1
Rhinosciurus laticaudatus Rhinosciurus laticaudatus 0, 1
rhinovirus 1, equine equine rhinovirus type 1 4, 0
rhinovirus 10, human human rhinovirus 10 3, 0
rhinovirus 100, human human rhinovirus 100 3, 0
rhinovirus 11, human human rhinovirus 11 3, 0
rhinovirus 12, human human rhinovirus 12 3, 0
rhinovirus 13, human human rhinovirus 13 3, 0
rhinovirus 14, human human rhinovirus 14 3, 0
rhinovirus 15, human human rhinovirus 15 3, 0
rhinovirus 16, human human rhinovirus 16 2, 0
rhinovirus 17, human human rhinovirus 17 3, 0
rhinovirus 18, human human rhinovirus 18 3, 0
rhinovirus 19, human human rhinovirus 19 3, 0
rhinovirus 1a, human human rhinovirus 1a 3, 0
rhinovirus 1b, human human rhinovirus 1b 3, 0
rhinovirus 2, equine equine rhinovirus type 2 1, 0
rhinovirus 2, human human rhinovirus 2 3, 0
rhinovirus 20, human human rhinovirus 20 3, 0
rhinovirus 21, human human rhinovirus 21 3, 0
rhinovirus 22, human human rhinovirus 22 3, 0
rhinovirus 23, human human rhinovirus 23 3, 0
rhinovirus 24, human human rhinovirus 24 3, 0
rhinovirus 25, human human rhinovirus 25 3, 0
rhinovirus 26, human human rhinovirus 26 3, 0
rhinovirus 27, human human rhinovirus 27 3, 0
rhinovirus 28, human human rhinovirus 28 3, 0
rhinovirus 29, human human rhinovirus 29 3, 0
rhinovirus 3, equine equine rhinovirus 3 1, 0
rhinovirus 3, human human rhinovirus 3 3, 0
rhinovirus 30, human human rhinovirus 30 3, 0
rhinovirus 31, human human rhinovirus 31 3, 0
rhinovirus 32, human human rhinovirus 32 3, 0
rhinovirus 33, human human rhinovirus 33 3, 0
rhinovirus 34, human human rhinovirus 34 3, 0
rhinovirus 35, human human rhinovirus 35 3, 0
rhinovirus 36, human human rhinovirus 36 3, 0
rhinovirus 37, human human rhinovirus 37 3, 0
rhinovirus 38, human human rhinovirus 38 3, 0
rhinovirus 39, human human rhinovirus 39 3, 0
rhinovirus 4, human human rhinovirus 4 3, 0
rhinovirus 40, human human rhinovirus 40 3, 0
rhinovirus 41, human human rhinovirus 41 3, 0
rhinovirus 42, human human rhinovirus 42 3, 0
rhinovirus 43, human human rhinovirus 43 3, 0
rhinovirus 44, human human rhinovirus 44 3, 0
rhinovirus 45, human human rhinovirus 45 3, 0
rhinovirus 46, human human rhinovirus 46 3, 0
rhinovirus 47, human human rhinovirus 47 3, 0
rhinovirus 48, human human rhinovirus 48 3, 0
rhinovirus 49, human human rhinovirus 49 3, 0
rhinovirus 5, human human rhinovirus 5 3, 0
rhinovirus 50, human human rhinovirus 50 3, 0
rhinovirus 51, human human rhinovirus 51 3, 0
rhinovirus 52, human human rhinovirus 52 3, 0
rhinovirus 53, human human rhinovirus 53 3, 0
rhinovirus 54, human human rhinovirus 54 3, 0
rhinovirus 55, human human rhinovirus 55 3, 0
rhinovirus 56, human human rhinovirus 56 3, 0
rhinovirus 57, human human rhinovirus 57 3, 0
rhinovirus 58, human human rhinovirus 58 3, 0
rhinovirus 59, human human rhinovirus 59 3, 0
rhinovirus 6, human human rhinovirus 6 3, 0
rhinovirus 60, human human rhinovirus 60 4, 0
rhinovirus 61, human human rhinovirus 61 3, 0
rhinovirus 62, human human rhinovirus 62 3, 0
rhinovirus 63, human human rhinovirus 63 3, 0
rhinovirus 64, human human rhinovirus 64 3, 0
rhinovirus 65, human human rhinovirus 65 3, 0
rhinovirus 66, human human rhinovirus 66 3, 0
rhinovirus 67, human human rhinovirus 67 3, 0
rhinovirus 68, human human rhinovirus 68 4, 0
rhinovirus 69, human human rhinovirus 69 3, 0
rhinovirus 7, human human rhinovirus 7 3, 0
rhinovirus 70, human human rhinovirus 70 3, 0
rhinovirus 71, human human rhinovirus 71 3, 0
rhinovirus 72, human human rhinovirus 72 3, 0
rhinovirus 73, human human rhinovirus 73 3, 0
rhinovirus 74, human human rhinovirus 74 3, 0
rhinovirus 75, human human rhinovirus 75 3, 0
rhinovirus 76, human human rhinovirus 76 3, 0
rhinovirus 77, human human rhinovirus 77 3, 0
rhinovirus 78, human human rhinovirus 78 3, 0
rhinovirus 79, human human rhinovirus 79 3, 0
rhinovirus 8, human human rhinovirus 8 3, 0
rhinovirus 80, human human rhinovirus 80 3, 0
rhinovirus 81, human human rhinovirus 81 3, 0
rhinovirus 82, human human rhinovirus 82 3, 0
rhinovirus 83, human human rhinovirus 83 3, 0
rhinovirus 84, human human rhinovirus 84 3, 0
rhinovirus 85, human human rhinovirus 85 3, 0
rhinovirus 86, human human rhinovirus 86 2, 0
rhinovirus 88, human human rhinovirus 88 3, 0
rhinovirus 89, human human rhinovirus 89 3, 0
rhinovirus 9, human human rhinovirus 9 3, 0
rhinovirus 90, human human rhinovirus 90 3, 0
rhinovirus 91, human human rhinovirus 91 3, 0
rhinovirus 92, human human rhinovirus 92 3, 0
rhinovirus 93, human human rhinovirus 93 3, 0
rhinovirus 94, human human rhinovirus 94 3, 0
rhinovirus 95, human human rhinovirus 95 4, 0
rhinovirus 96, human human rhinovirus 96 3, 0
rhinovirus 97, human human rhinovirus 97 3, 0
rhinovirus 98, human human rhinovirus 98 2, 0
rhinovirus 99, human human rhinovirus 99 3, 0
Rhinovirus A human rhinovirus A 159, 0
rhinovirus A1, human human rhinovirus 1a 3, 0
Rhinovirus B human rhinovirus B 62, 0
rhinovirus B, human human rhinovirus B 62, 0
Rhinovirus C Human rhinovirus C 109, 0
rhinovirus strain Hanks, human human rhinovirus strain Hanks 3, 0
rhinovirus type 1, equine equine rhinovirus type 1 4, 0
rhinovirus type 16, human human rhinovirus 16 2, 0
rhinovirus type 1A, human human rhinovirus 1a 3, 0
rhinovirus type 2, equine equine rhinovirus type 2 1, 0
rhinovirus, human human rhinovirus 4, 0
Rhiphicephalus sanguineus Rhipicephalus sanguineus 1, 0
Rhipicephalus (Boophilus) microplus Boophilus microplus 16, 1
Rhipicephalus annulatus Rhipicephalus annulatus 1, 0
Rhipicephalus appendiculatus Rhipicephalus appendiculatus 9, 0
Rhipicephalus decoloratus Boophilus decoloratus 1, 0
Rhipicephalus haemaphysaloides Rhipicephalus haemaphysaloides 2, 0
Rhipicephalus haemaphysaloides (Supino, 1897) Rhipicephalus haemaphysaloides 2, 0
Rhipicephalus haemaphysaloides haemaphysaloides Rhipicephalus haemaphysaloides 2, 0
Rhipicephalus microplus Boophilus microplus 16, 1
Rhipicephalus pulchellus Rhipicephalus pulchellus 194, 33
Rhipicephalus pulchellus (Gerstacker, 1873) Rhipicephalus pulchellus 194, 33
Rhipicephalus sanguineus Rhipicephalus sanguineus 1, 0
Rhipicephalus sanguineus (Latreille, 1806) Rhipicephalus sanguineus 1, 0
Rhipidomys mastacalis Rhipidomys mastacalis 0, 1
Rhizanthella gardneri Rhizanthella gardneri 1, 0
Rhizobacter sp. Root29 Rhizobacter sp. Root29 1, 0
Rhizobacterium leguminosarum Rhizobium leguminosarum 488, 185
Rhizobium BR816 Rhizobium sp. BR816 1, 1
Rhizobium ciceri Mesorhizobium ciceri 164, 57
Rhizobium etli Rhizobium etli 391, 143
Rhizobium etli 8C-3 Rhizobium etli 391, 143
Rhizobium etli Brasil 5 Rhizobium etli 391, 143
Rhizobium etli bv. mimosae str. IE4771 Rhizobium etli 391, 143
Rhizobium etli bv. mimosae str. Mim1 Rhizobium etli 391, 143
Rhizobium etli bv. phaseoli str. IE4803 Rhizobium etli 391, 143
Rhizobium etli CFN 42 Rhizobium etli 391, 143
Rhizobium etli CIAT 652 Rhizobium etli 391, 143
Rhizobium etli CIAT 894 Rhizobium etli 391, 143
Rhizobium etli CNPAF512 Rhizobium etli 391, 143
Rhizobium etli GR56 Rhizobium etli 391, 143
Rhizobium etli IE4771 Rhizobium etli 391, 143
Rhizobium etli Kim 5 Rhizobium etli 391, 143
Rhizobium fredii Sinorhizobium fredii 209, 64
Rhizobium freirei Rhizobium freirei 79, 27
Rhizobium freirei PRF 81 Rhizobium freirei 79, 27
Rhizobium galegae Rhizobium galegae 130, 48
Rhizobium gallicum Rhizobium gallicum 78, 22
Rhizobium gallicum bv. gallicum R602 Rhizobium gallicum 78, 22
Rhizobium giardinii Rhizobium giardinii 2, 1
Rhizobium grahamii Rhizobium grahamii 77, 27
Rhizobium grahamii CCGE 502 Rhizobium grahamii 77, 27
Rhizobium huakuii Mesorhizobium huakuii 78, 25
Rhizobium japonicum Bradyrhizobium japonicum 354, 109
Rhizobium leguminosarum Rhizobium leguminosarum 488, 185
Rhizobium leguminosarum bv. phaseoli CCGM1 Rhizobium leguminosarum 488, 185
Rhizobium leguminosarum bv. trifolii Rhizobium leguminosarum 488, 185
Rhizobium leguminosarum bv. trifolii TA1 Rhizobium leguminosarum 488, 185
Rhizobium leguminosarum bv. trifolii WSM1325 Rhizobium leguminosarum 488, 185
Rhizobium leguminosarum bv. trifolii WSM1689 Rhizobium leguminosarum 488, 185
Rhizobium leguminosarum bv. trifolii WSM2012 Rhizobium leguminosarum 488, 185
Rhizobium leguminosarum bv. trifolii WSM2297 Rhizobium leguminosarum 488, 185
Rhizobium leguminosarum bv. trifolii WSM2304 Rhizobium leguminosarum 488, 185
Rhizobium leguminosarum bv. trifolii WSM597 Rhizobium leguminosarum 488, 185
Rhizobium leguminosarum bv. trifolii WU95 Rhizobium leguminosarum 488, 185
Rhizobium leguminosarum bv. viciae Rhizobium leguminosarum 488, 185
Rhizobium leguminosarum bv. viciae 3841 Rhizobium leguminosarum 488, 185
Rhizobium leguminosarum bv. viciae USDA 2370 Rhizobium leguminosarum 488, 185
Rhizobium leguminosarum bv. viciae WSM1455 Rhizobium leguminosarum 488, 185
Rhizobium loti Mesorhizobium loti 198, 104
Rhizobium lupini Rhizobium lupini 63, 18
Rhizobium lupini H13-3 Agrobacterium sp. H13-3 108, 23
Rhizobium lupini HPC(L) Rhizobium lupini 63, 18
Rhizobium meliloti Sinorhizobium meliloti 221, 103
Rhizobium mesoamericanum Rhizobium mesoamericanum 73, 21
Rhizobium mesoamericanum STM3625 Rhizobium mesoamericanum 73, 21
Rhizobium nepotum Rhizobium nepotum 67, 13
Rhizobium nepotum 39/7 Rhizobium nepotum 67, 13
Rhizobium phage 16-3 Rhizobium phage 16-3 1, 1
Rhizobium phage RR1-A Rhizobium phage RR1-A 0, 2
Rhizobium phaseoli Rhizobium phaseoli 2, 0
Rhizobium radiobacter Agrobacterium tumefaciens 595, 267
Rhizobium rhizogenes Agrobacterium rhizogenes 120, 54
Rhizobium rhizogenes NBRC 13257 Agrobacterium rhizogenes 120, 54
Rhizobium rubi Agrobacterium rubi 72, 22
Rhizobium rubi NBRC 13261 Agrobacterium rubi 72, 22
Rhizobium sp. Rhizobium sp. 65, 22
Rhizobium sp. (strain BR816) Rhizobium sp. BR816 1, 1
Rhizobium sp. 2MFCol3.1 Rhizobium sp. 2MFCol3.1 2, 1
Rhizobium sp. 42MFCr.1 Rhizobium sp. 42MFCr.1 4, 1
Rhizobium sp. AP16 Rhizobium sp. AP16 98, 29
Rhizobium sp. BR816 Rhizobium sp. BR816 1, 1
Rhizobium sp. CCGE 510 Rhizobium sp. CCGE 510 79, 22
Rhizobium sp. CF080 Rhizobium sp. CF080 111, 32
Rhizobium sp. CF122 Rhizobium sp. CF122 88, 19
Rhizobium sp. CF142 Rhizobium sp. CF142 94, 37
Rhizobium sp. DS-S-51 Rhizobium sp. DS-S-51 0, 1
Rhizobium sp. H41 Rhizobium sp. H41 81, 20
Rhizobium sp. IRBG74 Rhizobium sp. IRBG74 119, 30
Rhizobium sp. JGI 0001005-H05 Rhizobium sp. JGI 0001005-H05 1, 0
Rhizobium sp. JGI 0001005-K05 Rhizobium sp. JGI 0001005-K05 1, 0
Rhizobium sp. LPU83 Rhizobium sp. LPU83 67, 31
Rhizobium sp. NT-26 Rhizobium sp. NT-26 12, 0
Rhizobium sp. PDO-076 Rhizobium sp. PDO1-076 99, 24
Rhizobium sp. PDO1-076 Rhizobium sp. PDO1-076 99, 24
Rhizobium sp. Pop5 Rhizobium sp. Pop5 73, 27
Rhizobium sp. R1-200B4 Rhizobium sp. R1-200B4 51, 16
Rhizobium sp. R2-400B4 Rhizobium sp. R2-400B4 55, 15
Rhizobium sp. strain BR816 Rhizobium sp. BR816 1, 1
Rhizobium sp. TAL1145 Rhizobium sp. TAL1145 1, 0
Rhizobium sp. UR51a Rhizobium sp. UR51a 65, 15
Rhizobium sp. YS-1r Rhizobium sp. YS-1r 75, 26
Rhizobium tianshanense Mesorhizobium tianshanense 0, 1
Rhizobium trifoli Rhizobium leguminosarum 488, 185
Rhizobium trifolii Rhizobium leguminosarum 488, 185
Rhizobium tropici Rhizobium tropici 82, 24
Rhizobium tropici CIAT 899 Rhizobium tropici 82, 24
Rhizobium tropici type B Rhizobium tropici 82, 24
Rhizobium vitis Agrobacterium vitis 116, 46
Rhizoctonia praticola Rhizoctonia solani 30, 3
Rhizoctonia solani Thanatephorus cucumeris 694, 307
Rhizoctonia solani Rhizoctonia solani 30, 3
Rhizoctonia solani 123E Rhizoctonia solani 30, 3
Rhizoctonia solani AG-1 IA Thanatephorus cucumeris 694, 307
Rhizoctonia solani AG-1 IB Rhizoctonia solani 30, 3
Rhizoctonia solani AG-3 Rhs1AP Rhizoctonia solani 30, 3
Rhizoctonia solani AG-8 WAC10335 Rhizoctonia solani 30, 3
Rhizomucor circinelloides Mucor circinelloides 175, 34
Rhizomucor miehei Rhizomucor miehei 1, 0
Rhizomucor pusillus Rhizomucor pusillus 1, 0
Rhizomucor racemosus Mucor racemosus 2, 0
Rhizophagus intraradices Rhizophagus intraradices 0, 1
Rhizophagus irregularis Rhizophagus irregularis 278, 92
Rhizophagus irregularis (strain DAOM 181602 / DAOM 197198 / MUCL 43194) Rhizophagus irregularis 278, 92
Rhizophagus irregularis DAOM 181602 Rhizophagus irregularis 278, 92
Rhizophagus irregularis DAOM 197198w Rhizophagus irregularis 278, 92
Rhizophora apiculata Rhizophora apiculata 1, 1
Rhizophora mangle Rhizophora mangle 1, 0
Rhizoplaca chrysoleuca Rhizoplaca chrysoleuca 1, 0
Rhizopogon roseolus Rhizopogon roseolus 1, 0
Rhizopogon vinicolor Rhizopogon vinicolor 2, 0
Rhizopogon vinicolor AM-OR11-026 Rhizopogon vinicolor 2, 0
Rhizopus arrhizus Rhizopus oryzae 166, 29
Rhizopus arrhizus var. arrhizus Rhizopus oryzae 166, 29
Rhizopus arrhizus var. delemar Rhizopus delemar 82, 33
Rhizopus chiuniang Rhizopus oryzae 166, 29
Rhizopus delemar Rhizopus oryzae 166, 29
Rhizopus delemar Rhizopus delemar 82, 33
Rhizopus delemar RA 99-880 Rhizopus delemar 82, 33
Rhizopus elegans Actinomucor elegans 2, 0
Rhizopus formosaensis Rhizopus oryzae 166, 29
Rhizopus formosaensis var. chlamydosporus Rhizopus oryzae 166, 29
Rhizopus hangchow Rhizopus oryzae 166, 29
Rhizopus javanicus Y. Takeda Rhizopus oryzae 166, 29
Rhizopus liquefaciens Rhizopus oryzae 166, 29
Rhizopus microsporus Rhizopus microsporus 348, 201
Rhizopus microsporus var. chinensis Rhizopus microsporus 348, 201
Rhizopus niveus Rhizopus niveus 5, 1
Rhizopus oryzae Rhizopus oryzae 166, 29
Rhizopus oryzae RA 99-880 Rhizopus oryzae 166, 29
Rhizopus oryzae var. delemar Rhizopus delemar 82, 33
Rhizopus peka Rhizopus oryzae 166, 29
Rhizopus pseudochinensis Rhizopus oryzae 166, 29
Rhizopus rhizopodiformis Rhizopus microsporus 348, 201
Rhizopus suinus Rhizopus oryzae 166, 29
Rhizopus tamarii Rhizopus oryzae 166, 29
Rhizopus thermosus Rhizopus oryzae 166, 29
Rhizopus tritici Rhizopus oryzae 166, 29
Rhizosolenia imbricata Rhizosolenia imbricata 1, 0
Rhodanobacter denitrificans Rhodanobacter denitrificans 27, 8
Rhodanobacter denitrificans Rhodanobacter denitrificans 121, 22
Rhodanobacter fulvus Rhodanobacter fulvus 74, 15
Rhodanobacter fulvus Jip2 Rhodanobacter fulvus 74, 15
Rhodanobacter sp. 115 Rhodanobacter sp. 115 90, 31
Rhodanobacter sp. 116-2 Rhodanobacter denitrificans 121, 22
Rhodanobacter sp. 2APBS1 Rhodanobacter denitrificans 27, 8
Rhodanobacter sp. OR444 Rhodanobacter sp. OR444 0, 2
Rhodanobacter sp. OR87 Rhodanobacter sp. OR87 2, 1
Rhodanobacter spathiphylli Rhodanobacter spathiphylli 111, 13
Rhodanobacter spathiphylli B39 Rhodanobacter spathiphylli 111, 13
Rhodanobacter thiooxydans Rhodanobacter thiooxydans 107, 21
Rhodanobacter thiooxydans LCS2 Rhodanobacter thiooxydans 107, 21
Rhodeus amarus Rhodeus amarus 0, 1
Rhodeus amarus (Bloch, 1782) Rhodeus amarus 0, 1
Rhodeus amarus meridionalis Rhodeus meridionalis 0, 1
Rhodeus amarus sericeus Rhodeus sericeus 0, 2
Rhodeus amurensis Rhodeus amurensis 0, 1
Rhodeus amurensis (Vronsky, 1967) Rhodeus amurensis 0, 1
Rhodeus atremius Rhodeus atremius 0, 2
Rhodeus atremius (Jordan & Thompson, 1914) Rhodeus atremius 0, 2
Rhodeus atremius atremius Rhodeus atremius 0, 2
Rhodeus atremius suigensis Rhodeus atremius 0, 2
Rhodeus colchicus Rhodeus colchicus 0, 1
Rhodeus colchicus Bogutskaya & Komlev, 2001 Rhodeus colchicus 0, 1
Rhodeus fangi Rhodeus fangi 0, 1
Rhodeus fangi (Miao, 1934) Rhodeus fangi 0, 1
Rhodeus meridionalis Rhodeus meridionalis 0, 1
Rhodeus notatus Rhodeus notatus 0, 1
Rhodeus notatus Nichols, 1929 Rhodeus notatus 0, 1
Rhodeus ocellatus Rhodeus ocellatus 0, 5
Rhodeus ocellatus (Kner, 1866) Rhodeus ocellatus 0, 5
Rhodeus ocellatus kurumeus Rhodeus ocellatus 0, 5
Rhodeus ocellatus ocellatus Rhodeus ocellatus 0, 5
Rhodeus pseudosericeus Rhodeus pseudosericeus 0, 1
Rhodeus pseudosericeus Arai, Jeon & Ueda, 200 Rhodeus pseudosericeus 0, 1
Rhodeus sericeus Rhodeus sericeus 0, 2
Rhodeus sericeus (Pallas, 1776) Rhodeus sericeus 0, 2
Rhodeus sericeus amarus Rhodeus amarus 0, 1
Rhodeus shitaiensis Rhodeus shitaiensis 0, 2
Rhodeus sinensis Rhodeus sinensis 0, 3
Rhodeus sinensis Gunther, 1868 Rhodeus sinensis 0, 3
Rhodeus suigensis Rhodeus suigensis 0, 1
Rhodeus suigensis (Mori, 1935) Rhodeus suigensis 0, 1
Rhodeus tanago Tanakia tanago 0, 1
Rhodinia fugax Rhodinia fugax 1, 0
Rhodnius prolixus Rhodnius prolixus 249, 133
Rhodobacillus palustris Rhodopseudomonas palustris 679, 210
Rhodobacter blastica Rhodobacter blasticus 1, 0
Rhodobacter blasticus Rhodobacter blasticus 1, 0
Rhodobacter capsulatus Rhodobacter capsulatus 89, 29
Rhodobacter capsulatus B6 Rhodobacter capsulatus 89, 29
Rhodobacter capsulatus DE442 Rhodobacter capsulatus 89, 29
Rhodobacter capsulatus phage RcapNL Rhodobacter phage RcapNL 1, 0
Rhodobacter capsulatus R121 Rhodobacter capsulatus 89, 29
Rhodobacter capsulatus SB 1003 Rhodobacter capsulatus 89, 29
Rhodobacter capsulatus SB1003 Rhodobacter capsulatus 89, 29
Rhodobacter capsulatus Y262 Rhodobacter capsulatus 89, 29
Rhodobacter capsulatus YW1 Rhodobacter capsulatus 89, 29
Rhodobacter capsulatus YW2 Rhodobacter capsulatus 89, 29
Rhodobacter massiliensis Haematobacter massiliensis 65, 23
Rhodobacter palustris Rhodopseudomonas palustris 679, 210
Rhodobacter phage RC1 Rhodobacter phage RC1 1, 0
Rhodobacter phage RcapMu Rhodobacter phage RcapMu 1, 0
Rhodobacter phage RcapNL Rhodobacter phage RcapNL 1, 0
Rhodobacter phage RcNL1 Rhodobacter phage RcNL1 1, 0
Rhodobacter sp. AKP1 Rhodobacter sp. AKP1 55, 13
Rhodobacter sp. CACIA14H1 Rhodobacter sp. CACIA14H1 47, 10
Rhodobacter sp. DW2-9 Paenirhodobacter enshiensis 44, 12
Rhodobacter sp. SW2 Rhodobacter sp. SW2 71, 21
Rhodobacter sphaeroides Rhodobacter sphaeroides 197, 84
Rhodobacter sphaeroides 2.4.1 Rhodobacter sphaeroides 197, 84
Rhodobacter sphaeroides ATCC 17025 Rhodobacter sphaeroides 197, 84
Rhodobacter sphaeroides ATCC 17029 Rhodobacter sphaeroides 197, 84
Rhodobacter sphaeroides KD131 Rhodobacter sphaeroides 197, 84
Rhodobacter sphaeroides WS8N Rhodobacter sphaeroides 197, 84
Rhodobacter sulfidiphilus Rhodovulum sulfidophilum 61, 17
Rhodobacter sulfidophilus Rhodovulum sulfidophilum 61, 17
Rhodobacteraceae bacterium 179 Rhodobacteraceae bacterium 179 0, 1
Rhodobacteraceae bacterium 198 Rhodobacteraceae bacterium 198 0, 1
Rhodobacteraceae bacterium HIMB11 unclassified Rhodobacteraceae 101, 31
Rhodobacteraceae bacterium HTCC2083 Rhodobacterales bacterium HTCC2083 78, 28
Rhodobacteraceae bacterium HTCC2150 Rhodobacterales bacterium HTCC2150 69, 28
Rhodobacteraceae bacterium KLH11 Rhodobacteraceae bacterium KLH11 82, 31
Rhodobacteraceae bacterium PD-2 unclassified Rhodobacteraceae 101, 31
Rhodobacterales bacterium HTCC2083 Rhodobacterales bacterium HTCC2083 78, 28
Rhodobacterales bacterium HTCC2150 Rhodobacterales bacterium HTCC2150 69, 28
Rhodobacterales bacterium HTCC2255 Rhodobacterales bacterium HTCC2255 107, 22
Rhodobacterales bacterium KLH11 Rhodobacteraceae bacterium KLH11 82, 31
Rhodobacterales bacterium Y4I Rhodobacterales bacterium Y4I 86, 31
Rhodobacterales proteobacterium HTCC2255 Rhodobacterales bacterium HTCC2255 107, 22
Rhodobacterium capsulatum Rhodopseudomonas palustris 679, 210
Rhodocista centenaria Rhodospirillum centenum 119, 34
Rhodococcus aetherivorans Rhodococcus aetherivorans 39, 14
Rhodococcus aetherivorans I24 Rhodococcus aetherivorans 39, 14
Rhodococcus aichiensis Gordonia aichiensis 51, 18
Rhodococcus aichiensis corrig. Tsukamura 1983 Gordonia aichiensis 51, 18
Rhodococcus aurantiacus Tsukamurella paurometabola 142, 60
Rhodococcus aurantiacus (ex Tsukamura and Mizuno 1971) Tsukamura and Yano 1985 Tsukamurella paurometabola 142, 60
Rhodococcus bacteriophage REQ1 Rhodococcus phage REQ1 2, 0
Rhodococcus bacteriophage REQ2 Rhodococcus phage REQ2 0, 2
Rhodococcus bacteriophage RER2 Rhodococcus phage RER2 1, 0
Rhodococcus bacteriophage RGL3 Rhodococcus phage RGL3 1, 0
Rhodococcus bronchialis Gordonia bronchialis 150, 68
Rhodococcus capsulatus Rhodobacter sphaeroides 197, 84
Rhodococcus chubuensis Gordonia sputi 84, 23
Rhodococcus corallinus Gordonia rubripertincta 58, 19
Rhodococcus equi Rhodococcus equi 170, 60
Rhodococcus equi 103S Rhodococcus equi 170, 60
Rhodococcus equi ATCC 33707 Rhodococcus equi 170, 60
Rhodococcus equi bacteriophage E3 Rhodococcus phage E3 1, 0
Rhodococcus equi NBRC 101255 = C 7 Rhodococcus equi 170, 60
Rhodococcus equi phage ReqiPine5 Rhodococcus phage ReqiPine5 1, 0
Rhodococcus erythropolis Rhodococcus erythropolis 287, 106
Rhodococcus erythropolis CCM2595 Rhodococcus erythropolis 287, 106
Rhodococcus erythropolis DN1 Rhodococcus erythropolis 287, 106
Rhodococcus erythropolis PR4 Rhodococcus erythropolis 287, 106
Rhodococcus erythropolis SK121 Rhodococcus erythropolis 287, 106
Rhodococcus fascians Rhodococcus fascians 5, 1
Rhodococcus fascians D188 Rhodococcus fascians 5, 1
Rhodococcus globerulus Rhodococcus globerulus 1, 0
Rhodococcus hoagii Rhodococcus equi 170, 60
Rhodococcus imtechensis Rhodococcus imtechensis 111, 32
Rhodococcus imtechensis RKJ300 Rhodococcus imtechensis 111, 32
Rhodococcus imtechensis RKJ300 = JCM 13270 Rhodococcus imtechensis 111, 32
Rhodococcus jostii Rhodococcus jostii 246, 121
Rhodococcus jostii RHA1 Rhodococcus jostii 246, 121
Rhodococcus lentifragmentus Rhodococcus ruber 93, 28
Rhodococcus luteus Rhodococcus fascians 5, 1
Rhodococcus M5 Rhodococcus sp. M5 1, 0
Rhodococcus minor Rhodobacter sphaeroides 197, 84
Rhodococcus obuensis Gordonia sputi 84, 23
Rhodococcus opacus Rhodococcus opacus 340, 158
Rhodococcus opacus B4 Rhodococcus opacus 340, 158
Rhodococcus opacus M213 Rhodococcus opacus 340, 158
Rhodococcus opacus PD630 Rhodococcus opacus 340, 158
Rhodococcus phage E3 Rhodococcus phage E3 1, 0
Rhodococcus phage REQ1 Rhodococcus phage REQ1 2, 0
Rhodococcus phage REQ2 Rhodococcus phage REQ2 0, 2
Rhodococcus phage ReqiPine5 Rhodococcus phage ReqiPine5 1, 0
Rhodococcus phage RER2 Rhodococcus phage RER2 1, 0
Rhodococcus phage RGL3 Rhodococcus phage RGL3 1, 0
Rhodococcus pyridinivorans Rhodococcus pyridinivorans 136, 41
Rhodococcus pyridinivorans AK37 Rhodococcus pyridinivorans 136, 41
Rhodococcus pyridinivorans SB3094 Rhodococcus pyridinivorans 136, 41
Rhodococcus qingshengii Rhodococcus qingshengii 116, 25
Rhodococcus qingshengii BKS 20-40 Rhodococcus qingshengii 116, 25
Rhodococcus rhodnii Rhodococcus rhodnii 49, 14
Rhodococcus rhodnii LMG 5362 Rhodococcus rhodnii 49, 14
Rhodococcus rhodochrous Rhodococcus rhodochrous 73, 27
Rhodococcus rhodochrous ATCC 21198 Rhodococcus rhodochrous 73, 27
Rhodococcus roseus Rhodococcus rhodochrous 73, 27
Rhodococcus ruber Rhodococcus ruber 93, 28
Rhodococcus ruber BKS 20-38 Rhodococcus ruber 93, 28
Rhodococcus rubripertinctus Gordonia rubripertincta 58, 19
Rhodococcus rubropertinctus Gordonia rubripertincta 58, 19
Rhodococcus sp. Rhodococcus sp. 6, 1
Rhodococcus sp. 114MFTsu3.1 Rhodococcus sp. 114MFTsu3.1 3, 0
Rhodococcus sp. 29MFTsu3.1 Rhodococcus sp. 29MFTsu3.1 3, 0
Rhodococcus sp. AD45 Rhodococcus sp. AD45 77, 17
Rhodococcus sp. AN-22 Rhodococcus sp. AN-22 1, 0
Rhodococcus sp. AW25M09 Rhodococcus sp. AW25M09 64, 14
Rhodococcus sp. B264-1 Rhodococcus sp. 6, 1
Rhodococcus sp. B7740 Rhodococcus sp. B7740 58, 22
Rhodococcus sp. BCP1 Rhodococcus sp. BCP1 24, 7
Rhodococcus sp. CDT3 Rhodococcus sp. CDT3 1, 0
Rhodococcus sp. Chr-9 Rhodococcus sp. Chr-9 55, 14
Rhodococcus sp. DFA3 Rhodococcus sp. DFA3 1, 0
Rhodococcus sp. DK17 Rhodococcus sp. DK17 3, 1
Rhodococcus sp. EsD8 Rhodococcus sp. EsD8 63, 19
Rhodococcus sp. JPL-2 Rhodococcus sp. JPL-2 1, 0
Rhodococcus sp. JVH1 Rhodococcus sp. JVH1 95, 24
Rhodococcus sp. M5 Rhodococcus sp. M5 1, 0
Rhodococcus sp. MB1 ’Bresler 1999’ Rhodococcus sp. MB1 ’Bresler 1999’ 1, 0
Rhodococcus sp. MB1 Bresler 1999 Rhodococcus sp. MB1 ’Bresler 1999’ 1, 0
Rhodococcus sp. MEB064 Rhodococcus sp. MEB064 46, 11
Rhodococcus sp. NS1 Rhodococcus sp. NS1 3, 1
Rhodococcus sp. P14 Rhodococcus sp. P14 22, 3
Rhodococcus sp. P27 Rhodococcus sp. P27 75, 31
Rhodococcus sp. Phi2 Rhodococcus sp. Phi2 0, 1
Rhodococcus sp. PML026 Rhodococcus sp. PML026 61, 14
Rhodococcus sp. PY11 Rhodococcus sp. PY11 2, 0
Rhodococcus sp. R1101 Rhodococcus sp. R1101 2, 0
Rhodococcus sp. S9 Rhodococcus sp. S9 1, 0
Rhodococcus sp. strain M5 Rhodococcus sp. M5 1, 0
Rhodococcus sp. T1(2011) Rhodococcus sp. T1(2011) 1, 0
Rhodococcus sp. YK2 Rhodococcus sp. YK2 3, 0
Rhodococcus sputi Gordonia sputi 84, 23
Rhodococcus terrae Gordonia terrae 114, 36
Rhodococcus triatomae Rhodococcus triatomae 64, 16
Rhodococcus triatomae BKS 15-14 Rhodococcus triatomae 64, 16
Rhodococcus wratislaviensis Rhodococcus wratislaviensis 135, 62
Rhodococcus wratislaviensis IFP 2016 Rhodococcus wratislaviensis 135, 62
Rhodococcus wratislaviensis NBRC 100605 Rhodococcus wratislaviensis 135, 62
Rhodocyclaceae bacterium PG1-Ca6 Rhodocyclaceae bacterium PG1-Ca6 34, 7
Rhodocyclaceae bacterium RZ94 Rhodocyclaceae bacterium RZ94 1, 0
Rhodocyclus gelatinosus Rubrivivax gelatinosus 118, 23
Rhodocyclus sp. UW 659-1-F08 Rhodocyclus sp. UW 659-1-F08 1, 0
Rhodocystis gelatinosa Rubrivivax gelatinosus 118, 23
Rhodoferax ferrireducens Rhodoferax ferrireducens 108, 27
Rhodoferax ferrireducens DSM 15236 Rhodoferax ferrireducens 108, 27
Rhodoferax ferrireducens T118 Rhodoferax ferrireducens 108, 27
Rhodoluna lacicola Rhodoluna lacicola 26, 4
Rhodomicrobium udaipurense Rhodomicrobium udaipurense 48, 12
Rhodomicrobium udaipurense JA643 Rhodomicrobium udaipurense 48, 12
Rhodomicrobium vannielii Rhodomicrobium vannielii 95, 12
Rhodomicrobium vannielii ATCC 17100 Rhodomicrobium vannielii 95, 12
Rhodomonas palustris Rhodopseudomonas palustris 679, 210
Rhodomonas salina Rhodomonas salina 3, 1
Rhodonellum psychrophilum Rhodonellum psychrophilum 91, 32
Rhodonellum psychrophilum GCM71 = DSM 17998 Rhodonellum psychrophilum 91, 32
Rhodoneura terminalis Rhodoneura terminalis 0, 1
Rhodonia placenta Postia placenta 99, 36
Rhodonostoc capsulatum Rhodobacter capsulatus 89, 29
Rhodopirellula baltica Rhodopirellula baltica 190, 60
Rhodopirellula baltica SH 1 Rhodopirellula baltica 190, 60
Rhodopirellula baltica SH28 Rhodopirellula baltica 190, 60
Rhodopirellula baltica SWK14 Rhodopirellula baltica 190, 60
Rhodopirellula baltica WH47 Rhodopirellula baltica 190, 60
Rhodopirellula europaea Rhodopirellula europaea 112, 39
Rhodopirellula europaea 6C Rhodopirellula europaea 112, 39
Rhodopirellula europaea SH398 Rhodopirellula europaea 112, 39
Rhodopirellula maiorica Rhodopirellula maiorica 77, 38
Rhodopirellula maiorica SM1 Rhodopirellula maiorica 77, 38
Rhodopirellula sallentina Rhodopirellula sallentina 57, 27
Rhodopirellula sallentina SM41 Rhodopirellula sallentina 57, 27
Rhodopirellula sp. 1S Rhodopirellula sp. 1S 0, 1
Rhodopirellula sp. 1SC Rhodopirellula sp. 1SC 1, 0
Rhodopirellula sp. 2S Rhodopirellula sp. 2S 1, 0
Rhodopirellula sp. 3S Rhodopirellula sp. 3S 1, 0
Rhodopirellula sp. 3SC Rhodopirellula sp. 3SC 1, 0
Rhodopirellula sp. 4SC Rhodopirellula sp. 4SC 1, 0
Rhodopirellula sp. 6C Rhodopirellula sp. 6C 1, 0
Rhodopirellula sp. 7C Rhodopirellula sp. 7C 0, 1
Rhodopirellula sp. 8C Rhodopirellula sp. 8C 0, 1
Rhodopirellula sp. CS109 Rhodopirellula sp. CS109 1, 0
Rhodopirellula sp. CS11 Rhodopirellula sp. CS11 1, 0
Rhodopirellula sp. CS115 Rhodopirellula sp. CS115 1, 0
Rhodopirellula sp. CS68 Rhodopirellula sp. CS68 1, 0
Rhodopirellula sp. CS7 Rhodopirellula sp. CS7 1, 0
Rhodopirellula sp. CS70 Rhodopirellula sp. CS70 0, 1
Rhodopirellula sp. CS71 Rhodopirellula sp. CS71 1, 0
Rhodopirellula sp. CS8 Rhodopirellula sp. CS8 1, 0
Rhodopirellula sp. CS9 Rhodopirellula sp. CS9 1, 0
Rhodopirellula sp. J183 Rhodopirellula sp. J183 1, 0
Rhodopirellula sp. K1070 Rhodopirellula sp. K1070 1, 0
Rhodopirellula sp. K249 Rhodopirellula sp. K249 1, 0
Rhodopirellula sp. K833 Rhodopirellula sp. K833 1, 0
Rhodopirellula sp. SM37 Rhodopirellula sp. SM37 1, 0
Rhodopirellula sp. SM38 Rhodopirellula sp. SM38 1, 0
Rhodopirellula sp. SWK21 Rhodopirellula sp. SWK21 0, 1
Rhodopirellula sp. SWK7 Rhodopirellula sp. SWK7 63, 26
Rhodopseudomonas blastica Rhodobacter blasticus 1, 0
Rhodopseudomonas capsulata Rhodobacter capsulatus 89, 29
Rhodopseudomonas capsulatus Rhodobacter capsulatus 89, 29
Rhodopseudomonas gelatinosa Rubrivivax gelatinosus 118, 23
Rhodopseudomonas palustris Rhodopseudomonas palustris 679, 210
Rhodopseudomonas palustris BisA53 Rhodopseudomonas palustris 679, 210
Rhodopseudomonas palustris BisB18 Rhodopseudomonas palustris 679, 210
Rhodopseudomonas palustris BisB5 Rhodopseudomonas palustris 679, 210
Rhodopseudomonas palustris CGA009 Rhodopseudomonas palustris 679, 210
Rhodopseudomonas palustris DX-1 Rhodopseudomonas palustris 679, 210
Rhodopseudomonas palustris HaA2 Rhodopseudomonas palustris 679, 210
Rhodopseudomonas palustris Rpal_1 Rhodopseudomonas palustris 679, 210
Rhodopseudomonas palustris TIE-1 Rhodopseudomonas palustris 679, 210
Rhodopseudomonas rutila Rhodopseudomonas palustris 679, 210
Rhodopseudomonas sphaeroides Rhodobacter sphaeroides 197, 84
Rhodopseudomonas spheroides Rhodobacter sphaeroides 197, 84
Rhodopseudomonas sulfidophila Rhodovulum sulfidophilum 61, 17
Rhodorhagus capsulatus Rhodobacter sphaeroides 197, 84
Rhodorhagus minor Rhodobacter sphaeroides 197, 84
Rhodorrhagus capsulatus Rhodobacter sphaeroides 197, 84
Rhodorrhagus spheroides Rhodobacter sphaeroides 197, 84
Rhodosphaera capsulata Rhodobacter sphaeroides 197, 84
Rhodosphaera minor Rhodobacter sphaeroides 197, 84
Rhodospirillaceae bacterium BRH_c57 Rhodospirillaceae bacterium BRH_c57 18, 5
Rhodospirillum centenum Rhodospirillum centenum 119, 34
Rhodospirillum centenum SW Rhodospirillum centenum 119, 34
Rhodospirillum fulvum Phaeospirillum fulvum 41, 6
Rhodospirillum giganteum Rhodospirillum rubrum 90, 23
Rhodospirillum gracile Rhodospirillum rubrum 90, 23
Rhodospirillum longum Rhodospirillum rubrum 90, 23
Rhodospirillum molischianum Phaeospirillum molischianum 61, 14
Rhodospirillum photometricum Rhodospirillum photometricum 65, 25
Rhodospirillum photometricum DSM 122 Rhodospirillum photometricum 65, 25
Rhodospirillum rubrum Rhodospirillum rubrum 90, 23
Rhodospirillum rubrum ATCC 11170 Rhodospirillum rubrum 90, 23
Rhodospirillum rubrum F11 Rhodospirillum rubrum 90, 23
Rhodosporidium paludigenum Rhodosporidium paludigenum 0, 1
Rhodosporidium toruloides Rhodosporidium toruloides 134, 30
Rhodosporidium toruloides (strain NP11) Rhodosporidium toruloides 134, 30
Rhodosporidium toruloides NP11 Rhodosporidium toruloides 134, 30
Rhodothermus marinus Rhodothermus marinus 131, 45
Rhodothermus marinus DSM 4252 Rhodothermus marinus 131, 45
Rhodothermus marinus SG0.5JP17-172 Rhodothermus marinus 131, 45
Rhodothermus obamae Rhodothermus marinus 131, 45
Rhodothermus obamensis Rhodothermus marinus 131, 45
Rhodothermus phage RM378 Bacteriophage RM 378 1, 0
Rhodothermus sp. Rhodothermus sp. 1, 0
Rhodothermus sp. ITI 518 Rhodothermus sp. 1, 0
Rhodothermus sp. XMH10 Rhodothermus sp. XMH10 0, 1
Rhodotorula araucariae Rhodotorula araucariae 0, 1
Rhodotorula glutinis Rhodotorula glutinis 46, 15
Rhodotorula glutinis ATCC 204091 Rhodotorula glutinis 46, 15
Rhodotorula gracilis Rhodosporidium toruloides 134, 30
Rhodotorula graminis Rhodotorula graminis 1, 0
Rhodotorula mucilaginosa Rhodotorula mucilaginosa 1, 0
Rhodotorula pilimanae Rhodotorula mucilaginosa 1, 0
Rhodotorula rubescens Rhodosporidium toruloides 134, 30
Rhodotorula rubra Rhodotorula mucilaginosa 1, 0
Rhodotorula sp. JG-1b Methylobacter sp. JG-1 1, 0
Rhodovibrio parvus Rhodopseudomonas palustris 679, 210
Rhodovulum phage RS1 Rhodovulum phage RS1 1, 0
Rhodovulum sp. NI22 Rhodovulum sp. NI22 47, 6
Rhodovulum sp. PH10 Rhodovulum sp. PH10 70, 13
Rhodovulum sulfidophilum Rhodovulum sulfidophilum 61, 17
Rhombosolea tapirina Rhombosolea tapirina 0, 1
Rhombosolea tapirina Gunther, 1862 Rhombosolea tapirina 0, 1
Rhombus maximus Scophthalmus maximus 8, 3
Rhopalosiphum padi Rhopalosiphum padi 0, 1
Rhopalosiphum padi (Linnaeus, 1758) Rhopalosiphum padi 0, 1
Rhopalosiphum padi virus Rhopalosiphum padi virus 1, 0
Rhynchana greyi Gonorynchus greyi 0, 1
Rhynchocyon petersi Rhynchocyon petersi 0, 1
Rhynchocyon sp. CJD-2003 Rhynchocyon sp. CJD-2003 0, 1
Rhynchocypris percnurus Rhynchocypris percnurus 0, 1
Rhynchocypris perenurus Rhynchocypris percnurus 0, 1
Rhynchoryza subulata Rhynchoryza subulata 1, 1
Rhynchostracion nasus Ostracion nasus 0, 1
Rhynchostracion rhinorhynchos Ostracion rhinorhynchos 0, 1
Rhysipolis sp. 2 BJS-2011 Rhysipolis sp. 2 BJS-2011 0, 1
Rhytidoponera chalybaea Rhytidoponera chalybaea 0, 1
Rhyzopertha dominica Rhyzopertha dominica 4, 0
ribbon seal Phoca fasciata 0, 2
Ribes nigrum Ribes nigrum 1, 0
rice Oryza sativa 1464, 377
rice blast fungus Magnaporthe oryzae 327, 103
rice cutgrass Leersia oryzoides 1, 0
rice leaffolder Cnaphalocrocis medinalis 4, 0
Rice stripe necrosis virus Rice stripe necrosis virus 1, 0
rice tungro bacilliform virus rice tungro bacilliform virus 2, 0
rice tungro bacilliform virus, RTBV rice tungro bacilliform virus 2, 0
rice tungro spherical virus rice tungro spherical virus 1, 0
rice tungro spherical virus RTSV rice tungro spherical virus 1, 0
rice tungro spherical waikavirus rice tungro spherical virus 1, 0
rice weevil Sitophilus oryzae 5, 0
Rice yellow dwarf phytoplasma Candidatus Phytoplasma oryzae 1, 0
rice yellow mottle virus rice yellow mottle virus 1, 0
rice, African Oryza glaberrima 384, 86
rice, African wild Oryza barthii 457, 195
rice, common wild Oryza rufipogon 549, 175
rice, long-staminate Oryza longistaminata 2, 0
rice, red Oryza rufipogon 549, 175
rice-field eel Monopterus albus 1, 0
rice-field rat Rattus argentiventer 0, 10
ricefield mouse Mus caroli 2, 4
Richelia intracellularis Richelia intracellularis 105, 48
Richelia intracellularis HH01 Richelia intracellularis 105, 48
Richelia intracellularis HM01 Richelia intracellularis 105, 48
Richelia sp. AO9565 Richelia sp. AO9565 1, 0
Richelia sp. PO9804-4 Richelia sp. PO9804-4 1, 0
Richelia sp. PO9804-5 Richelia sp. PO9804-5 1, 0
Richelia sp. PO9811-3 Richelia sp. PO9811-3 1, 0
Richelia sp. PO9814-5 Richelia sp. PO9814-5 1, 0
Richelia sp. PO9847-2 Richelia sp. PO9847-2 1, 0
Richelia sp. PO9847-3 Richelia sp. PO9847-3 1, 0
Richelia sp. PO9847-9 Richelia sp. PO9847-9 1, 0
Ricinus communis Ricinus communis 537, 110
Ricinus communis L. Ricinus communis 537, 110
Ricinus sanguineus Ricinus communis 537, 110
Ricinus sanguineus hort. ex Groenl. Ricinus communis 537, 110
Rickettsia africae Rickettsia africae 34, 7
Rickettsia africae ESF-5 Rickettsia africae 34, 7
Rickettsia akamushi Rickettsia tsutsugamushi 31, 14
Rickettsia akari Rickettsia akari 31, 3
Rickettsia akari Hartford Rickettsia akari 31, 3
Rickettsia akari str. Hartford Rickettsia akari 31, 3
Rickettsia amblyommii Candidatus Rickettsia amblyommii 33, 7
Rickettsia argasii Rickettsia argasii 19, 9
Rickettsia argasii T170-B Rickettsia argasii 19, 9
Rickettsia australis Rickettsia australis 30, 4
Rickettsia australis Cutlack Rickettsia australis 30, 4
Rickettsia australis str. Cutlack Rickettsia australis 30, 4
Rickettsia azadi Rickettsia felis 45, 2
Rickettsia bellii Rickettsia bellii 51, 8
Rickettsia bellii OSU 85-389 Rickettsia bellii 51, 8
Rickettsia bellii RML369-C Rickettsia bellii 51, 8
Rickettsia bellii str. RML An4 Rickettsia bellii 51, 8
Rickettsia bellii str. RML Mogi Rickettsia bellii 51, 8
Rickettsia buchneri Rickettsia buchneri 25, 7
Rickettsia burneti Coxiella burnetii 65, 21
Rickettsia canada Rickettsia canadensis 33, 3
Rickettsia canadensis Rickettsia canadensis 33, 3
Rickettsia canadensis CA410 Rickettsia canadensis 33, 3
Rickettsia canadensis McKiel Rickettsia canadensis 33, 3
Rickettsia canadensis str. CA410 Rickettsia canadensis 33, 3
Rickettsia canadensis str. McKiel Rickettsia canadensis 33, 3
Rickettsia canis Ehrlichia canis 27, 7
Rickettsia conorii Rickettsia conorii 39, 6
Rickettsia conorii Malish 7 Rickettsia conorii 39, 6
Rickettsia conorii str. Malish 7 Rickettsia conorii 39, 6
Rickettsia diaporica Coxiella burnetii 65, 21
Rickettsia endosymbiont of Bemisia tabaci Rickettsia endosymbiont of Bemisia tabaci 2, 0
Rickettsia endosymbiont of Ixodes pacificus Rickettsia endosymbiont of Ixodes pacificus 21, 12
Rickettsia endosymbiont of Ixodes scapularis Rickettsia endosymbiont of Ixodes scapularis 33, 9
Rickettsia felis Rickettsia felis 45, 2
Rickettsia felis str. Pedreira Rickettsia felis 45, 2
Rickettsia felis URRWXCal2 Rickettsia felis 45, 2
Rickettsia heilongjiangensis Rickettsia heilongjiangensis 31, 7
Rickettsia heilongjiangensis 054 Rickettsia heilongjiangensis 31, 7
Rickettsia heilongjiangii Rickettsia heilongjiangensis 31, 7
Rickettsia helvetica Rickettsia helvetica 8, 0
Rickettsia helvetica C9P9 Rickettsia helvetica 8, 0
Rickettsia honei Rickettsia honei 2, 0
Rickettsia hoogstraalii Rickettsia hoogstraalii 24, 7
Rickettsia hoogstraalii str. RCCE3 Rickettsia hoogstraalii 24, 7
Rickettsia japonica Rickettsia japonica 32, 5
Rickettsia japonica YH Rickettsia japonica 32, 5
Rickettsia massiliae Rickettsia massiliae 37, 2
Rickettsia massiliae AZT80 Rickettsia massiliae 37, 2
Rickettsia massiliae MTU5 Rickettsia massiliae 37, 2
Rickettsia massiliae str. AZT80 Rickettsia massiliae 37, 2
Rickettsia monacensis Rickettsia monacensis 22, 8
Rickettsia monacensis IrR/Munich Rickettsia monacensis 22, 8
Rickettsia montana Rickettsia montanensis 30, 6
Rickettsia montanensis Rickettsia montanensis 30, 6
Rickettsia montanensis OSU 85-930 Rickettsia montanensis 30, 6
Rickettsia montanensis str. OSU 85-930 Rickettsia montanensis 30, 6
Rickettsia mooseri Rickettsia typhi 31, 3
Rickettsia orientalis Rickettsia tsutsugamushi 31, 14
Rickettsia parkeri Rickettsia parkeri 32, 4
Rickettsia parkeri Portsmouth Rickettsia parkeri 32, 4
Rickettsia parkeri str. AT#24 Rickettsia parkeri 32, 4
Rickettsia parkeri str. Grand Bay Rickettsia parkeri 32, 4
Rickettsia parkeri str. Portsmouth Rickettsia parkeri 32, 4
Rickettsia peacockii Rickettsia peacockii 32, 3
Rickettsia peacockii Rustic Rickettsia peacockii 32, 3
Rickettsia peacockii str. Rustic Rickettsia peacockii 32, 3
Rickettsia pediculi Bartonella quintana 41, 12
Rickettsia phagocytophila Anaplasma phagocytophilum 25, 17
Rickettsia phagocytophila ovis Anaplasma phagocytophilum 25, 17
Rickettsia philipii Rickettsia philipii 32, 4
Rickettsia philipii 364D Rickettsia philipii 32, 4
Rickettsia philipii str. 364D Rickettsia philipii 32, 4
Rickettsia prowazekii Rickettsia prowazekii 32, 4
Rickettsia prowazekii BuV67-CWPP Rickettsia prowazekii 32, 4
Rickettsia prowazekii Chernikova Rickettsia prowazekii 32, 4
Rickettsia prowazekii Dachau Rickettsia prowazekii 32, 4
Rickettsia prowazekii GvV257 Rickettsia prowazekii 32, 4
Rickettsia prowazekii Katsinyian Rickettsia prowazekii 32, 4
Rickettsia prowazekii Madrid E Rickettsia prowazekii 32, 4
Rickettsia prowazekii Rp22 Rickettsia prowazekii 32, 4
Rickettsia prowazekii RpGvF24 Rickettsia prowazekii 32, 4
Rickettsia prowazekii str. Breinl Rickettsia prowazekii 32, 4
Rickettsia prowazekii str. BuV67-CWPP Rickettsia prowazekii 32, 4
Rickettsia prowazekii str. Cairo 3 Rickettsia prowazekii 32, 4
Rickettsia prowazekii str. Chernikova Rickettsia prowazekii 32, 4
Rickettsia prowazekii str. Dachau Rickettsia prowazekii 32, 4
Rickettsia prowazekii str. GvF12 Rickettsia prowazekii 32, 4
Rickettsia prowazekii str. GvV257 Rickettsia prowazekii 32, 4
Rickettsia prowazekii str. Katsinyian Rickettsia prowazekii 32, 4
Rickettsia prowazekii str. Madrid E Rickettsia prowazekii 32, 4
Rickettsia prowazekii str. NMRC Madrid E Rickettsia prowazekii 32, 4
Rickettsia prowazekii str. Rp22 Rickettsia prowazekii 32, 4
Rickettsia prowazekii str. RpGvF24 Rickettsia prowazekii 32, 4
Rickettsia psittaci Chlamydophila psittaci 31, 10
Rickettsia quintana Bartonella quintana 41, 12
Rickettsia rhipicephali Rickettsia rhipicephali 35, 8
Rickettsia rhipicephali 3-7-female6-CWPP Rickettsia rhipicephali 35, 8
Rickettsia rhipicephali str. 3-7-female6-CWPP Rickettsia rhipicephali 35, 8
Rickettsia rhipicephali str. Ect Rickettsia rhipicephali 35, 8
Rickettsia rickettsii Rickettsia rickettsii 37, 1
Rickettsia rickettsii ’Sheila Smith’ Rickettsia rickettsii 37, 1
Rickettsia rickettsii (Wolbach 1919) Brumpt 1922 Rickettsia rickettsii 37, 1
Rickettsia rickettsii Arizona Rickettsia rickettsii 37, 1
Rickettsia rickettsii Brazil Rickettsia rickettsii 37, 1
Rickettsia rickettsii Colombia Rickettsia rickettsii 37, 1
Rickettsia rickettsii Hauke Rickettsia rickettsii 37, 1
Rickettsia rickettsii Hino Rickettsia rickettsii 37, 1
Rickettsia rickettsii Hlp#2 Rickettsia rickettsii 37, 1
Rickettsia rickettsii Iowa Rickettsia rickettsii 37, 1
Rickettsia rickettsii str. ’Sheila Smith’ Rickettsia rickettsii 37, 1
Rickettsia rickettsii str. Arizona Rickettsia rickettsii 37, 1
Rickettsia rickettsii str. Brazil Rickettsia rickettsii 37, 1
Rickettsia rickettsii str. Colombia Rickettsia rickettsii 37, 1
Rickettsia rickettsii str. Hauke Rickettsia rickettsii 37, 1
Rickettsia rickettsii str. Hino Rickettsia rickettsii 37, 1
Rickettsia rickettsii str. Hlp#2 Rickettsia rickettsii 37, 1
Rickettsia rickettsii str. Iowa Rickettsia rickettsii 37, 1
Rickettsia rickettsii str. Sheila Smith Rickettsia rickettsii 37, 1
Rickettsia ruminantium Ehrlichia ruminantium 28, 8
Rickettsia sennetsu Neorickettsia sennetsu 22, 7
Rickettsia sennetsu Misao and Kobayashi 1956 (Approved Lists 1980) Neorickettsia sennetsu 22, 7
Rickettsia sibirica Rickettsia sibirica 39, 4
Rickettsia sibirica 246 Rickettsia sibirica 39, 4
Rickettsia slovaca Rickettsia slovaca 37, 5
Rickettsia slovaca 13-B Rickettsia slovaca 37, 5
Rickettsia slovaca D-CWPP Rickettsia slovaca 37, 5
Rickettsia slovaca str. D-CWPP Rickettsia slovaca 37, 5
Rickettsia sp. ELB Rickettsia felis 45, 2
Rickettsia sp. F30 Candidatus Rickettsia asemboensis 23, 2
Rickettsia trachomae Chlamydia trachomatis 387, 205
Rickettsia trachomatis Chlamydia trachomatis 387, 205
Rickettsia tsutsugamushi Rickettsia tsutsugamushi 31, 14
Rickettsia typhi Rickettsia typhi 31, 3
Rickettsia typhi B9991CWPP Rickettsia typhi 31, 3
Rickettsia typhi str. B9991CWPP Rickettsia typhi 31, 3
Rickettsia typhi str. TH1527 Rickettsia typhi 31, 3
Rickettsia typhi str. Wilmington Rickettsia typhi 31, 3
Rickettsia typhi TH1527 Rickettsia typhi 31, 3
Rickettsia typhi Wilmington Rickettsia typhi 31, 3
Rickettsia weigli Bartonella quintana 41, 12
Rickettsia wolhynica Bartonella quintana 41, 12
Rickettsiaceae bacterium Os18 Rickettsiaceae bacterium Os18 2, 0
Rickettsiaformis psittacosis Chlamydophila psittaci 31, 10
Rickettsiales bacterium Ac37b Rickettsiales bacterium Ac37b 23, 5
Rickettsiales bacterium SCGC AAA041-L04 Rickettsiales bacterium SCGC AAA041-L04 12, 3
rickettsialpox Rickettsia akari 31, 3
Rickettsiella grylli Rickettsiella grylli 32, 6
Ridgeia piscesae endosymbiont endosymbiont of Ridgeia piscesae 1, 0
Riemerella anatipestifer Riemerella anatipestifer 72, 23
Riemerella anatipestifer ATCC 11845 = DSM 15868 Riemerella anatipestifer 72, 23
Riemerella anatipestifer DSM 15868 Riemerella anatipestifer 72, 23
Riemerella anatipestifer RA-CH-1 Riemerella anatipestifer 72, 23
Riemerella anatipestifer RA-CH-2 Riemerella anatipestifer 72, 23
Riemerella anatipestifer RA-GD Riemerella anatipestifer 72, 23
Riemerella anatipestifer RA-YM Riemerella anatipestifer 72, 23
Riemerella anatipestifer-like Riemerella columbina 2, 1
Riemerella columbina Riemerella columbina 2, 1
Riesia pediculicola Candidatus Riesia pediculicola 16, 3
rifleman Acanthisitta chloris 432, 209
Riftia pachyptila endosymbiont endosymbiont of Riftia pachyptila 55, 7
rigid boxfish Caprichthys gymnura 0, 1
Rileys lappet moth Heteropacha rileyana 0, 1
Rimicaris exoculata Rimicaris exoculata 0, 3
Ring-tailed lemur Lemur catta 2, 2
ring-tailed mongoose Galidia elegans 0, 1
ringed brown snake Pseudonaja modesta 1, 1
Ringed seal Pusa hispida 0, 1
Ringelnatter Natrix natrix 2, 2
ringneck dove Streptopelia risoria 0, 1
Ringneck snake Diadophis punctatus 1, 0
ringspot virus, African oil palm African oil palm ringspot virus 1, 0
ringspot virus, beet beet ringspot virus 2, 0
ringspot virus, papaya papaya ringspot virus 10, 0
ringspot virus, tobacco tobacco ringspot virus 1, 0
ringspot virus, tomato tomato ringspot virus 1, 0
Rio Bravo virus Rio Bravo virus 1, 0
Rio Grande shiner Notropis jemezanus 0, 1
Rio Grande sucker Catostomus plebeius 0, 5
Riptortus clavatus Riptortus clavatus 0, 2
Riptortus pedestris Riptortus pedestris 47, 19
Risso’s dolphin Grampus griseus 1, 0
Rissos dolphin Grampus griseus 1, 0
Ristella capillosa Pseudoflavonifractor capillosus 86, 21
Ristella clostridiiformis Clostridium clostridioforme 218, 89
Ristella corrodens Eikenella corrodens 54, 12
Ristella cylindroides Faecalitalea cylindroides 60, 10
Ristella distasonis Parabacteroides distasonis 225, 66
Ristella fragilis Bacteroides fragilis 321, 196
Ristella incommunis Bacteroides fragilis 321, 196
Ristella melaninogenica Prevotella melaninogenica 95, 25
Ristella nodosa Dichelobacter nodosus 49, 13
Ristella ochraceus Capnocytophaga ochracea 79, 25
Ristella oralis Prevotella oralis 72, 35
Ristella perfoetens Fusobacterium perfoetens 1, 0
Ristella putredinis Alistipes putredinis 60, 15
Ristella uncata Bacteroides fragilis 321, 196
Rivea corymbosa Turbina corymbosa 1, 0
river blackfish Gadopsis marmoratus 0, 1
river buffalo Bubalus bubalis 709, 250
river chub Nocomis micropogon 0, 3
river redhorse Moxostoma carinatum 0, 5
river stone carp Psilorhynchus sucatio 0, 1
rivet wheat Triticum turgidum 2, 0
Rivularia sp. LIP Rivularia sp. PCC 7116 120, 24
Rivularia sp. PCC 7116 Rivularia sp. PCC 7116 120, 24
Rivulus marmoratus Rivulus marmoratus 9, 1
rivulus, mangrove Rivulus marmoratus 9, 1
RNA similarity group I Pseudomonas nov. sp. 13, 18
roach minnow Rutilus rutilus 0, 1
Roanoke hog sucker Hypentelium roanokense 0, 1
roatelo, brown Mesitornis unicolor 412, 212
Robiginitalea biformata Robiginitalea biformata 112, 37
Robiginitalea biformata HTCC2501 Robiginitalea biformata 112, 37
Robiginitomaculum antarcticum Robiginitomaculum antarcticum 4, 0
Robinia pseudoacacia Robinia pseudoacacia 1, 0
Robinsoniella sp. KNHs210 Robinsoniella sp. KNHs210 1, 0
robust redhorse Moxostoma robustum 0, 1
robusta coffee Coffea canephora 382, 137
Roccus labrax Dicentrarchus labrax 69, 13
Rochalimaea elizabethae Bartonella elizabethae 37, 4
Rochalimaea henselae Bartonella henselae 42, 10
Rochalimaea quintana Bartonella quintana 41, 12
Rochalimaea vinsonii Bartonella vinsonii 59, 9
Rochalimaea vinsonii Weiss and Dasch 1982 Bartonella vinsonii 59, 9
Rocio virus Ilheus virus 1, 0
rock crab Cancer pagurus 0, 2
rock dassie Procavia capensis 325, 103
rock dove Columba livia 487, 161
rock gunnel Pholis gunnellus 0, 1
rock honeybee Apis dorsata 341, 97
rock hyrax Procavia capensis 325, 103
rock pigeon Columba livia 487, 161
rock samphire Crithmum maritimum 1, 0
rock sole Lepidopsetta bilineata 0, 1
rock stickleback Xiphister mucosus 1, 0
rock worm Arenicola marina 3, 0
rock-loving mouse Mus saxicola 0, 1
rock-pool mosquito Ochlerotatus atropalpus 1, 0
rockcod Trematomus bernacchii 8, 7
rockcod, black Notothenia coriiceps 534, 370
rockcod, emerald Trematomus bernacchii 8, 7
rocotillo Capsicum chinense 3, 2
Rodent herpesvirus Peru Rodent herpesvirus Peru 1, 0
Rodentolepis microstoma Hymenolepis microstoma 142, 85
Roeslerstammia pronubella Roeslerstammia pronubella 0, 1
Rogeria stigmatica Rogeria stigmatica 1, 0
Rohita chrysophekadion Labeo chrysophekadion 0, 1
Rohita melanopleura Osteochilus melanopleurus 0, 1
Rohita microcephalus Osteochilus microcephalus 0, 1
Rohita vittata Osteochilus vittatus 0, 1
Rohita waandersii Osteochilus waandersii 0, 1
rohu Labeo rohita 0, 4
Rolepa sp. JCR-2007 Rolepa sp. JCR-2007 0, 1
roller, cuckoo Leptosomus discolor 185, 59
Romalea guttata Romalea microptera 0, 1
Romalea guttata (Houttuyn, 1813) Romalea microptera 0, 1
Romalea guttata (Stoll, 1813) Romalea microptera 0, 1
Romalea microptera Romalea microptera 0, 1
Romalea microptera (Beauvois, 1817) Romalea microptera 0, 1
Romalea micropterum Romalea microptera 0, 1
Romalea reticulatus Romalea microptera 0, 1
Romanogobio ciscaucasicus Romanogobio ciscaucasicus 0, 1
Romanogobio ciscaucasicus (Berg, 1932) Romanogobio ciscaucasicus 0, 1
Romanomermis culicivorax Romanomermis culicivorax 218, 331
Rondeletia sp. AD-2003 Rondeletia sp. AD-2003 0, 1
Rondotia menciana Rondotia menciana 1, 0
roof rat Rattus rattus 2, 16
root Staphylococcus epidermidis 233, 48
root-knot nematode Meloidogyne javanica 0, 2
rootstock stem lesion associated virus, grapevine grapevine rootstock stem lesion associated virus 1, 0
Rorippa nasturtium-aquaticum Nasturtium officinale 1, 0
Rosa gigantea Rosa odorata 1, 0
Rosa odorata Rosa odorata 1, 0
Rosa rugosa Rosa rugosa 2, 0
Rosa rugosa Thunb. Rosa rugosa 2, 0
Rosa x borboniana Rosa x borboniana 1, 0
Rosa x borboniana N.H.F.Desp. Rosa x borboniana 1, 0
Rosa x odorata Rosa odorata 1, 0
Rosavirus M-7 Rosavirus M-7 1, 0
rose gum Eucalyptus grandis 999, 328
Rose yellow mosaic virus Rose yellow mosaic virus 4, 0
rose-bay Nerium oleander 1, 0
Rose-of-Sharon Hibiscus syriacus 1, 0
Roseburia hominis Roseburia hominis 88, 22
Roseburia hominis A2-183 Roseburia hominis 88, 22
Roseburia intestinalis Roseburia intestinalis 126, 32
Roseburia intestinalis CAG:13 Roseburia intestinalis 126, 32
Roseburia intestinalis L1-82 Roseburia intestinalis 126, 32
Roseburia intestinalis M50/1 Roseburia intestinalis 126, 32
Roseburia intestinalis XB6B4 Roseburia intestinalis 126, 32
Roseburia inulinivorans Roseburia inulinivorans 99, 29
Roseburia inulinivorans CAG:15 Roseburia inulinivorans 99, 29
Roseburia inulinivorans DSM 16841 Roseburia inulinivorans 99, 29
Roseburia rectale Eubacterium rectale 125, 29
Roseburia sp. CAG:100 Roseburia sp. CAG:100 55, 14
Roseburia sp. CAG:18 Roseburia sp. CAG:18 45, 10
Roseburia sp. CAG:182 Roseburia sp. CAG:182 42, 15
Roseburia sp. CAG:197 Roseburia sp. CAG:197 51, 5
Roseburia sp. CAG:303 Roseburia sp. CAG:303 41, 6
Roseburia sp. CAG:309 Roseburia sp. CAG:309 32, 14
Roseburia sp. CAG:380 Roseburia sp. CAG:380 39, 20
Roseburia sp. CAG:45 Roseburia sp. CAG:45 46, 9
Roseburia sp. CAG:471 Roseburia sp. CAG:471 50, 17
Roseburia sp. CAG:50 Roseburia sp. CAG:50 39, 17
Roseibacterium elongatum Roseibacterium elongatum 44, 9
Roseibacterium elongatum DSM 19469 Roseibacterium elongatum 44, 9
Roseibium sp. TrichSKD4 Roseibium sp. TrichSKD4 102, 30
Roseiflexus castenholzii Roseiflexus castenholzii 129, 33
Roseiflexus castenholzii DSM 13941 Roseiflexus castenholzii 129, 33
Roseiflexus sp. RS-1 Roseiflexus sp. RS-1 104, 22
Roseivivax atlanticus Roseivivax atlanticus 62, 15
Roseivivax halodurans Roseivivax halodurans 62, 19
Roseivivax halodurans JCM 10272 Roseivivax halodurans 62, 19
Roseivivax isoporae Roseivivax isoporae 69, 23
Roseivivax isoporae LMG 25204 Roseivivax isoporae 69, 23
Roseivivax sp. 22II-s10s Roseivivax atlanticus 62, 15
Rosellinia necatrix Rosellinia necatrix 2, 0
Roseobacter denitrificans Roseobacter denitrificans 89, 29
Roseobacter denitrificans OCh 114 Roseobacter denitrificans 89, 29
Roseobacter denitrificans Shiba 1991 Roseobacter denitrificans 89, 29
Roseobacter gallaeciensis Phaeobacter gallaeciensis 137, 42
Roseobacter litoralis Roseobacter litoralis 97, 36
Roseobacter litoralis Och 149 Roseobacter litoralis 97, 36
Roseobacter litoralis Shiba 1991 Roseobacter litoralis 97, 36
Roseobacter phage RDJL Phi 1 Roseobacter phage RDJL Phi 1 1, 0
Roseobacter sp. AzwK-3b Roseobacter sp. AzwK-3b 81, 32
Roseobacter sp. CCS2 Roseobacter sp. CCS2 69, 23
Roseobacter sp. GAI101 Roseobacter sp. GAI101 102, 23
Roseobacter sp. ISM Roseovarius nubinhibens 86, 33
Roseobacter sp. MED193 Roseobacter sp. MED193 102, 27
Roseobacter sp. SK209-2-6 Roseobacter sp. SK209-2-6 89, 25
Roseomonas cervicalis Roseomonas cervicalis 109, 25
Roseomonas cervicalis ATCC 49957 Roseomonas cervicalis 109, 25
Roseomonas fauriae Azospirillum brasilense 123, 41
Roseomonas sp. B5 Roseomonas sp. B5 5, 0
Roseophage RDJL Phi 1 Roseobacter phage RDJL Phi 1 1, 0
Roseovarius mucosus Roseovarius mucosus 56, 17
Roseovarius mucosus DSM 17069 Roseovarius mucosus 56, 17
Roseovarius nubinhibens Roseovarius nubinhibens 86, 33
Roseovarius nubinhibens ISM Roseovarius nubinhibens 86, 33
Roseovarius sp. 217 Roseovarius sp. 217 96, 22
Roseovarius sp. BRH_c41 Roseovarius sp. BRH_c41 59, 15
Roseovarius sp. HTCC2601 Roseovarius sp. HTCC2601 58, 15
Roseovarius sp. TM1035 Roseovarius sp. TM1035 88, 22
rosette virus, turnip turnip rosette virus 2, 0
Ross River virus Ross River virus 5, 0
Ross river virus (STRAIN NB5092) Ross River virus 5, 0
Ross river virus (STRAIN T48) Ross River virus 5, 0
Rostratula benghalensis Rostratula benghalensis 0, 1
Rostratula benghalensis australis Rostratula benghalensis 0, 1
rosy barb Puntius conchonius 1, 0
rosy bitterling Rhodeus ocellatus 0, 5
rosy bitterling Rhodeus notatus 0, 1
rosy boa Charina trivirgata 2, 0
rosy periwinkle Catharanthus roseus 2, 0
rosyface shiner Notropis rubellus 0, 1
Rothia aeria Rothia aeria 44, 21
Rothia aeria F0184 Rothia aeria 44, 21
Rothia aeria F0474 Rothia aeria 44, 21
Rothia denticariosa Rothia dentocariosa 83, 20
Rothia dentocariosa Rothia dentocariosa 83, 20
Rothia dentocariosa ATCC 17931 Rothia dentocariosa 83, 20
Rothia dentocariosa M567 Rothia dentocariosa 83, 20
Rothia mucilaginosa Rothia mucilaginosa 70, 16
Rothia mucilaginosa ATCC 25296 Rothia mucilaginosa 70, 16
Rothia mucilaginosa DY-18 Rothia mucilaginosa 70, 16
Rothia mucilaginosa M508 Rothia mucilaginosa 70, 16
Rothschildia orizaba Rothschildia orizaba 0, 1
Rothschilds Mallomys Mallomys rothschildi 0, 1
rotklee Trifolium pratense 8, 0
Rotylenchulus reniformis Rotylenchulus reniformis 1, 0
rough green snake Opheodrys aestivus 8, 1
rough pigweed Amaranthus retroflexus 0, 1
rough shiner Notropis baileyi 0, 1
rough-toothed dolphin Steno bredanensis 0, 1
roughnose grenadier Trachyrincus murrayi 0, 1
roughskin sculpin Trachidermus fasciatus 0, 2
round scad Decapterus punctatus 0, 1
roundbelly cowfish Lactoria diaphana 0, 1
Roundia cardiophora Roundia cardiophora 1, 0
roundworm Caenorhabditis elegans 430, 95
roundworm, pig Ascaris suum 337, 150
Rous avian sarcoma virus Rous avian sarcoma virus 1, 0
Rous sarcoma virus Rous avian sarcoma virus 1, 0
Rous sarcoma virus RSV Rous avian sarcoma virus 1, 0
Rousettus aegyptiacus Rousettus aegyptiacus 3, 0
Rousettus aegypticus Rousettus aegyptiacus 3, 0
Rousettus bat coronavirus HKU10 Bat coronavirus HKU10 1, 0
Rousettus bat coronavirus HKU9 Rousettus bat coronavirus HKU9 6, 0
Rousettus egyptiacus Rousettus aegyptiacus 3, 0
Rousettus leschenaulti Rousettus leschenaulti 1, 2
Rousettus leschenaultii Rousettus leschenaulti 1, 2
Rousettus leschenaultii (Desmarest, 1830) Rousettus leschenaulti 1, 2
Rousettus leschenaultii retrovirus Rousettus leschenaultii retrovirus 1, 0
Roya anglica Roya anglica 1, 0
royal crane Balearica regulorum 428, 197
Royal Farm virus Royal Farm virus 2, 0
royal gramma Gramma loreto 0, 1
royal python Python regius 8, 1
Rozella allomycis Rozella allomycis 86, 21
Rozella allomycis CSF55 Rozella allomycis 86, 21
RTSV rice tungro spherical virus 1, 0
rubber tree, Para Hevea brasiliensis 5, 5
rubbertree Hevea brasiliensis 5, 5
Rubella virus Rubella virus 1, 0
Rubella virus strain BRD1 Rubella virus 1, 0
Rubella virus strain BRDII Rubella virus 1, 0
Rubella virus strain Cendehill Rubella virus 1, 0
Rubella virus strain M33 Rubella virus 1, 0
Rubella virus strain RN-UK86 Rubella virus 1, 0
Rubella virus strain TO-336 vaccine Rubella virus 1, 0
Rubella virus vaccine strain RA27/3 Rubella virus 1, 0
Rubellimicrobium mesophilum Rubellimicrobium mesophilum 49, 17
Rubellimicrobium mesophilum DSM 19309 Rubellimicrobium mesophilum 49, 17
Rubellimicrobium thermophilum Rubellimicrobium thermophilum 40, 19
Rubellimicrobium thermophilum DSM 16684 Rubellimicrobium thermophilum 40, 19
Rubidibacter lacunae Rubidibacter lacunae 58, 12
Rubidibacter lacunae KORDI 51-2 Rubidibacter lacunae 58, 12
Rubinisphaera brasiliensis Rubinisphaera brasiliensis 6, 3
Rubrisciurus rubriventer Rubrisciurus rubriventer 0, 1
Rubritalea marina Rubritalea marina 2, 0
Rubrivivax benzoatilyticus Rubrivivax benzoatilyticus 94, 13
Rubrivivax benzoatilyticus JA2 Rubrivivax benzoatilyticus 94, 13
Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 Rubrivivax benzoatilyticus 94, 13
Rubrivivax gelatinosus Rubrivivax gelatinosus 118, 23
Rubrivivax gelatinosus IL144 Rubrivivax gelatinosus 118, 23
Rubrivivax gelatinosus PM1 Rubrivivax gelatinosus 118, 23
Rubrivivax gelatinosus S1 Rubrivivax gelatinosus 118, 23
Rubrobacter radiotolerans Rubrobacter radiotolerans 62, 17
Rubrobacter xylanophilus Rubrobacter xylanophilus 98, 35
Rubrobacter xylanophilus DSM 9941 Rubrobacter xylanophilus 98, 35
Rubus chlorotic mottle virus Rubus chlorotic mottle virus 1, 0
ruby-throated hummingbird Archilochus colubris 0, 1
Rucervus duvauceli Rucervus duvaucelii 0, 1
Rucervus duvaucelii Rucervus duvaucelii 0, 1
Rudaea cellulosilytica Rudaea cellulosilytica 10, 4
Rudanella lutea Rudanella lutea 8, 1
Rudbeckia flower distortion virus Rudbeckia flower distortion virus 1, 0
rudd Scardinius erythrophthalmus 0, 1
Rudds mouse Uranomys ruddi 0, 1
ruddy quail-dove Geotrygon montana 0, 1
Ruditapes decussatus Venerupis decussatus 0, 1
Ruditapes philippinarum Venerupis philippinarum 1, 0
Ruegeria conchae Ruegeria sp. TW15 78, 11
Ruegeria lacuscaerulensis Ruegeria lacuscaerulensis 73, 14
Ruegeria mobilis Ruegeria mobilis 75, 22
Ruegeria mobilis F1926 Ruegeria mobilis 75, 22
Ruegeria pomeroyi Ruegeria pomeroyi 127, 71
Ruegeria pomeroyi DSS-3 Ruegeria pomeroyi 127, 71
Ruegeria sp. ANG-R Ruegeria sp. ANG-R 59, 12
Ruegeria sp. ANG-S4 Ruegeria sp. ANG-S4 51, 18
Ruegeria sp. PR1b Ruegeria sp. PR1b 6, 1
Ruegeria sp. R11 Ruegeria sp. R11 82, 25
Ruegeria sp. TM1040 Silicibacter sp. TM1040 107, 47
Ruegeria sp. TW15 Ruegeria sp. TW15 78, 11
Ruellia breedlovei Ruellia breedlovei 1, 0
Ruellia breedlovei T.F.Daniel Ruellia breedlovei 1, 0
ruff Philomachus pugnax 14, 0
ruffe Gymnocephalus cernuus 0, 2
ruffed lemur Varecia variegata 1, 4
Rufibacter sp. DG31D Rufibacter sp. DG31D 1, 0
Rufibacter tibetensis Rufibacter tibetensis 2, 0
rufous elephant shrew Elephantulus rufescens 1, 0
rufous-nosed rat Oenomys hypoxanthus 0, 3
rumen organism LC Megasphaera elsdenii 64, 24
Ruminobacter ruminicola Prevotella ruminicola 92, 26
Ruminobacter succinogenes Fibrobacter succinogenes 73, 24
Ruminococcaceae bacterium 585-1 Ruminococcaceae bacterium 585-1 49, 14
Ruminococcaceae bacterium D16 Ruminococcaceae bacterium D16 77, 12
Ruminococcus albus Ruminococcus albus 195, 45
Ruminococcus albus 7 Ruminococcus albus 195, 45
Ruminococcus albus 8 Ruminococcus albus 195, 45
Ruminococcus albus SY3 Ruminococcus albus 195, 45
Ruminococcus bicirculans Ruminococcus bicirculans 44, 7
Ruminococcus bromii Ruminococcus bromii 52, 11
Ruminococcus bromii L2-63 Ruminococcus bromii 52, 11
Ruminococcus callidus Ruminococcus callidus 33, 12
Ruminococcus callidus ATCC 27760 Ruminococcus callidus 33, 12
Ruminococcus callidus Holdeman and Moore 1974 Ruminococcus callidus 33, 12
Ruminococcus champanellensis Ruminococcus champanellensis 50, 17
Ruminococcus champanellensis 18P13 Ruminococcus champanellensis 50, 17
Ruminococcus flavefaciens Ruminococcus flavefaciens 116, 24
Ruminococcus flavefaciens 007c Ruminococcus flavefaciens 116, 24
Ruminococcus flavefaciens FD-1 Ruminococcus flavefaciens 116, 24
Ruminococcus gauvreauii Ruminococcus gauvreauii 2, 0
Ruminococcus gnavus Ruminococcus gnavus 80, 26
Ruminococcus gnavus ATCC 29149 Ruminococcus gnavus 80, 26
Ruminococcus gnavus CAG:126 Ruminococcus gnavus 80, 26
Ruminococcus gnavus CC55_001C Ruminococcus gnavus 80, 26
Ruminococcus hansenii Blautia hansenii 73, 22
Ruminococcus hydrogenotrophicus Blautia hydrogenotrophica 90, 27
Ruminococcus lactaris Ruminococcus lactaris 72, 22
Ruminococcus lactaris ATCC 29176 Ruminococcus lactaris 72, 22
Ruminococcus lactaris CC59_002D Ruminococcus lactaris 72, 22
Ruminococcus obeum Ruminococcus obeum 120, 39
Ruminococcus obeum A2-162 Ruminococcus obeum 120, 39
Ruminococcus obeum ATCC 29174 Ruminococcus obeum 120, 39
Ruminococcus obeum CAG:39 Ruminococcus obeum 120, 39
Ruminococcus productus Blautia producta 1, 0
Ruminococcus schinkii Blautia schinkii 1, 0
Ruminococcus sp. Ruminococcus sp. 1, 0
Ruminococcus sp. 5_1_39BFAA Ruminococcus sp. 5_1_39BFAA 83, 17
Ruminococcus sp. 5_1_39B_FAA Ruminococcus sp. 5_1_39BFAA 83, 17
Ruminococcus sp. 80/3 Ruminococcus bicirculans 44, 7
Ruminococcus sp. CAG:108 Ruminococcus sp. CAG:108 33, 9
Ruminococcus sp. CAG:17 Ruminococcus sp. CAG:17 40, 17
Ruminococcus sp. CAG:177 Ruminococcus sp. CAG:177 31, 11
Ruminococcus sp. CAG:254 Ruminococcus sp. CAG:254 32, 6
Ruminococcus sp. CAG:330 Ruminococcus sp. CAG:330 31, 14
Ruminococcus sp. CAG:353 Ruminococcus sp. CAG:353 33, 12
Ruminococcus sp. CAG:379 Ruminococcus sp. CAG:379 30, 5
Ruminococcus sp. CAG:382 Ruminococcus sp. CAG:382 34, 7
Ruminococcus sp. CAG:403 Ruminococcus sp. CAG:403 32, 8
Ruminococcus sp. CAG:488 Ruminococcus sp. CAG:488 39, 7
Ruminococcus sp. CAG:55 Ruminococcus sp. CAG:55 38, 13
Ruminococcus sp. CAG:563 Ruminococcus sp. CAG:563 34, 6
Ruminococcus sp. CAG:57 Ruminococcus sp. CAG:57 40, 9
Ruminococcus sp. CAG:579 Ruminococcus sp. CAG:579 30, 11
Ruminococcus sp. CAG:60 Ruminococcus sp. CAG:60 56, 21
Ruminococcus sp. CAG:624 Ruminococcus sp. CAG:624 23, 14
Ruminococcus sp. CAG:724 Ruminococcus sp. CAG:724 42, 9
Ruminococcus sp. CAG:9 Ruminococcus sp. CAG:9 45, 14
Ruminococcus sp. CAG:90 Ruminococcus sp. CAG:90 40, 15
Ruminococcus sp. JC304 Ruminococcus sp. JC304 2, 1
Ruminococcus sp. NK3A76 Ruminococcus sp. NK3A76 1, 0
Ruminococcus sp. SR1/5 Ruminococcus sp. SR1/5 68, 21
Ruminococcus torques Ruminococcus torques 128, 33
Ruminococcus torques ATCC 27756 Ruminococcus torques 128, 33
Ruminococcus torques CAG:61 Ruminococcus torques 128, 33
Ruminococcus torques L2-14 Ruminococcus torques 128, 33
Runella limosa Runella limosa 2, 0
Runella slithyformis Runella slithyformis 197, 54
Runella slithyformis DSM 19594 Runella slithyformis 197, 54
Rupela albina Rupela albina 0, 1
Rupestris stem pitting associated virus, grapevine grapevine Rupestris stem pitting associated virus 1, 0
Rupestris stem pitting-associated virus Rupestris stem pitting-associated virus 2, 0
Rupicapra rupicapra Rupicapra rupicapra 0, 1
Ruppellia multisetosis Ruppellia multisetosis 0, 1
Rusa unicolor Rusa unicolor 1, 0
Ruscus aculeatus Ruscus aculeatus 1, 0
Russell’s viper Daboia russellii 3, 0
Russells viper Daboia russellii 3, 0
Russian wheat aphid Diuraphis noxia 4, 1
Russula sp. TJ00/35 Russula sp. TJ00/35 0, 1
rust-red flour beetle Tribolium castaneum 534, 186
rusty-bellied brush-furred rat Lophuromys sikapusi 0, 2
rusty-spotted cat Prionailurus rubiginosa 1, 0
rustyside sucker Thoburnia hamiltoni 0, 3
Rutilus rutilus Rutilus rutilus 0, 1
Rutilus rutilus (Linnaeus, 1758) Rutilus rutilus 0, 1
Rutstroemia henningsiana Poculum henningsianum 1, 0
Ruvettus pretiosus Ruvettus pretiosus 0, 1
Ruvettus pretiosus Cocco, 1833 Ruvettus pretiosus 0, 1
Ruwenzori horseshoe bat Rhinolophus ruwenzorii 1, 0
rye Secale cereale 1, 3
ryegrass mosaic virus ryegrass mosaic virus 3, 0
ryegrass mottle virus ryegrass mottle virus 1, 0
ryegrass, Italian Lolium multiflorum 2, 0
ryegrass, perennial Lolium perenne 10, 4
rymovirus, brome streak mosaic brome streak mosaic virus 3, 0
Rypticus saponaceus Rypticus saponaceus 0, 1
Ryukyu mouse Mus caroli 2, 4